RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 HDCP19113 662 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 DDX6P26196 483 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMG6-209ENST00000571442 WEE1P30291 646 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 GDI1P31150 447 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SOX5P35711 763 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SOX9P48436 509 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 DAOAP59103 153 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SLC7A9P82251 487 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 FMO1Q01740 532 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SIGLEC14Q08ET2 396 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 FCHO2Q0JRZ9 810 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 C2CD6Q53TS8 623 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 FKBP15Q5T1M5 1219 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 NAIF1Q69YI7 327 aaPredicted RBP7.35□□□□□ -1.23
SMG6-209ENST00000571442 CWF19L1Q69YN2 538 aaKnown RBP7.35□□□□□ -1.23
SMG6-209ENST00000571442 PM20D1Q6GTS8 502 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 TRIM67Q6ZTA4 783 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 CCDC186Q7Z3E2 898 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 MFSD6LQ8IWD5 586 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 C1orf131Q8NDD1 294 aaKnown RBP7.35□□□□□ -1.23
SMG6-209ENST00000571442 TTC16Q8NEE8 873 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 TTC8Q8TAM2 541 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 BPIFB1Q8TDL5 484 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 EPS8L1Q8TE68 723 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SH3RF2Q8TEC5 729 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 KCTD13Q8WZ19 329 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 OVCA2Q8WZ82 227 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SLITRK1Q96PX8 696 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 CPXM1Q96SM3 734 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 PCDHB18PQ96TA0 734 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 UBXN6Q9BZV1 441 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 LINC00597Q9H2U6 94 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 CYLDQ9NQC7 956 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 HPS4Q9NQG7 708 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 SLC2A4RGQ9NR83 387 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 GKN1Q9NS71 199 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 TDP1Q9NUW8 608 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMG6-209ENST00000571442 COMMD8Q9NX08 183 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 IFNKQ9P0W0 207 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 HESX1Q9UBX0 185 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 NOCTQ9UK39 431 aaKnown RBP7.35□□□□□ -1.23
SMG6-209ENST00000571442 CA14Q9ULX7 337 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 ARHGAP26Q9UNA1 814 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 CPQQ9Y646 472 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 MIA3Q5JRA6 1907 aa7.35□□□□□ -1.23
SMG6-209ENST00000571442 WDFY4Q6ZS81 3184 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 ANTXRLA6NF34 631 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TMEM221A6NGB7 291 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 E5RJQ4 531 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 M0R296 226 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TLR5O60602 858 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 ZBED1O96006 694 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 SERPINC1P01008 464 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 ERBB2P04626 1255 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 CKMP06732 381 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TPM2P07951 284 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 MBL2P11226 248 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 RARGP13631 454 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 CD72P21854 359 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 CDH5P33151 784 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 AVPR1AP37288 418 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 UBASH3AP57075 661 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 YWHAGP61981 247 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMG6-209ENST00000571442 PITX1P78337 314 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 PTK2Q05397 1052 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 GOLGA8FQ08AF8 430 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 GOLGA8DPQ0D2H9 430 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 PDCLQ13371 301 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 ZNF268Q14587 947 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 MTF1Q14872 753 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 STILQ15468 1287 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TAF5Q15542 800 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 GAB4Q2WGN9 574 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 PTPN20Q4JDL3 420 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 HECTD3Q5T447 861 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 DNAAF5Q86Y56 855 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 SCUBE3Q8IX30 993 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 CELF5Q8N6W0 485 aaKnown RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 ANKRD20A12PQ8NF67 263 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 NEK11Q8NG66 645 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 EDEM1Q92611 657 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 NXPE3Q969Y0 559 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 HSFY1Q96LI6 401 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 FAM81BQ96LP2 452 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 PCMTD1Q96MG8 357 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 FAM83CQ9BQN1 747 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 SYT11Q9BT88 431 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TRMT61BQ9BVS5 477 aaKnown RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 KLF16Q9BXK1 252 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 XPO4Q9C0E2 1151 aaKnown RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 MIS12Q9H081 205 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 FBXO44Q9H4M3 255 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 LRRC4Q9HBW1 653 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 TLR8Q9NR97 1041 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms