RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 KRT82Q9NSB4 513 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 COMMD8Q9NX08 183 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 MBD1Q9UIS9 605 aaPredicted RBP18.6■□□□□ 0.57
CIITA-206ENST00000571190 ANGPTL2Q9UKU9 493 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 ACACBO00763 2458 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 ATP8B3O60423 1300 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 TPRP12270 2363 aaKnown RBP18.59■□□□□ 0.57
CIITA-206ENST00000571190 GIPC1O14908 333 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 TRIM24O15164 1050 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 NDST1P52848 882 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 GAD2Q05329 585 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 SGSM1Q2NKQ1 1148 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 SPOPLQ6IQ16 392 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 CEP57L1Q8IYX8 460 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 C12orf29Q8N999 325 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 SLC2A14Q8TDB8 520 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 TMC2Q8TDI7 906 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 SPHK2Q9NRA0 654 aa18.59■□□□□ 0.57
CIITA-206ENST00000571190 HHLA1C9JL84 531 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 PDXKO00764 312 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 TULP3O75386 442 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 ALDH1A2O94788 518 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 TBX18O95935 607 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 ASS1P00966 412 aaKnown RBP18.58■□□□□ 0.56
CIITA-206ENST00000571190 ASPAP45381 313 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 MAP3K7CLP57077 242 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 IRX4P78413 519 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 MAP7D1Q3KQU3 841 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 EOGTQ5NDL2 527 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 PSAPL1Q6NUJ1 521 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 GPRIN1Q7Z2K8 1008 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 CYP2U1Q7Z449 544 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 TWNKQ96RR1 684 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 EXOC1Q9NV70 894 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 OSER1Q9NX31 292 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 SH3BP1Q9Y3L3 701 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 SDK1Q7Z5N4 2213 aa18.58■□□□□ 0.56
CIITA-206ENST00000571190 ANAPC1Q9H1A4 1944 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 KMT2BQ9UMN6 2715 aaPredicted RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 KHNYNO15037 678 aaKnown RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 TLR5O60602 858 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 NR3C1P04150 777 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 RPN1P04843 607 aaKnown RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 IRF1P10914 325 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 DHPSP49366 369 aaPredicted RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 HTR3DQ70Z44 454 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 UNC93AQ86WB7 457 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 MIB1Q86YT6 1006 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 WHAMMQ8TF30 809 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 PIGKQ92643 395 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 CHAMP1Q96JM3 812 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 KLF16Q9BXK1 252 aaPredicted RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 APOBEC3GQ9HC16 384 aaKnown RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 POLMQ9NP87 494 aaPredicted RBP18.57■□□□□ 0.56
CIITA-206ENST00000571190 FAM49BQ9NUQ9 324 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 TMEM74BQ9NUR3 256 aa18.57■□□□□ 0.56
CIITA-206ENST00000571190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 A0A1B0GVL5 298 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 TCRBV21S2A2A0A5A6 115 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 TBC1D3BA6NDS4 549 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 IKBKBO14920 756 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 HLA-DRAP01903 254 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 PFKFB1P16118 471 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 PTGER3P43115 390 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 TMEFF1Q8IYR6 380 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 TERB1Q8NA31 727 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 HMGB4Q8WW32 186 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 TAF4BQ92750 862 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 HNRNPABQ99729 332 aaKnown RBP18.56■□□□□ 0.56
CIITA-206ENST00000571190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.56■□□□□ 0.56
CIITA-206ENST00000571190 DEC1Q9P2X7 70 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 CFAP45Q9UL16 551 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 TRAF3IP3Q9Y228 551 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 HPSEQ9Y251 543 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 GREB1Q4ZG55 1949 aa18.56■□□□□ 0.56
CIITA-206ENST00000571190 CLSTN1O94985 981 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 P4HA1P13674 534 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 CMA1P23946 247 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 NOVA1P51513 510 aaKnown RBP18.55■□□□□ 0.56
CIITA-206ENST00000571190 INCA1Q0VD86 236 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 ANO4Q32M45 955 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 DAB2IPQ5VWQ8 1189 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 BTBD8Q5XKL5 378 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 CEP135Q66GS9 1140 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 CLEC20AQ6ZU45 233 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 ARMCX6Q7L4S7 300 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 ZNF513Q8N8E2 541 aaPredicted RBP18.55■□□□□ 0.56
CIITA-206ENST00000571190 KCNV2Q8TDN2 545 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 P2RY11Q96G91 374 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 FBXO44Q9H4M3 255 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 NMUR1Q9HB89 426 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 CD248Q9HCU0 757 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 CYLDQ9NQC7 956 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 EVLQ9UI08 416 aaPredicted RBP18.55■□□□□ 0.56
CIITA-206ENST00000571190 WASF3Q9UPY6 502 aa18.55■□□□□ 0.56
CIITA-206ENST00000571190 ZFHX4Q86UP3 3567 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms