RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NSD3Q9BZ95 1437 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 MAP3K19Q56UN5 1328 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 CRYBG1Q9Y4K1 1723 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 FLT4P35916 1363 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 NFAT5O94916 1531 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 GCOM1H8Y6P7 765 aaPredicted RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 MYO1FO00160 1098 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 URI1O94763 535 aaPredicted RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 IGLV2-14P01704 120 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 HRGP04196 525 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 MYBP10242 640 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 XRCC6P12956 609 aaKnown RBP eCLIP4.94□□□□□ -1.62
NUP88-202ENST00000570937 EN2P19622 333 aaPredicted RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 ITPKBP27987 946 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 TNNT2P45379 298 aaPredicted RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 UCP3P55916 312 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 LILRA4P59901 499 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 BMPR2Q13873 1038 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 RRS1Q15050 365 aaKnown RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 LMBRD2Q68DH5 695 aaPredicted RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 ZNF783Q6ZMS7 281 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 GAS2L3Q86XJ1 694 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 OR6B3Q8NGW1 331 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 ATRIPQ8WXE1 791 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 RAPGEF4Q8WZA2 1011 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 MESP1Q9BRJ9 268 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 C22orf23Q9BZE7 217 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 FAM204AQ9H8W3 233 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 SMURF2Q9HAU4 748 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 SERTAD4Q9NUC0 356 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 PTGFRNQ9P2B2 879 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 ARPP21Q9UBL0 812 aaPredicted RBP4.94□□□□□ -1.62
NUP88-202ENST00000570937 SHOC2Q9UQ13 582 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 SSX2IPQ9Y2D8 614 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 PAXBP1Q9Y5B6 917 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 GLI3P10071 1580 aa4.94□□□□□ -1.62
NUP88-202ENST00000570937 GOLGA6CA6NDK9 693 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 GOLGA6BA6NDN3 693 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 A6NNZ2 444 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 LINC00473A8K010 186 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 BTN3A1O00481 513 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 NXPH3O95157 252 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 GOLGA6DP0CG33 693 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 KITP10721 976 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 ZFXP17010 805 aaPredicted RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 HMGB2P26583 209 aaKnown RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 PCSK6P29122 969 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 LRPAP1P30533 357 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 CTBP1Q13363 440 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 GBX1Q14549 363 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 CNN3Q15417 329 aaKnown RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 TBCCQ15814 346 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 ARHGAP29Q52LW3 1261 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 HSP90AB2PQ58FF8 381 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 PLAC9Q5JTB6 97 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 ZNF618Q5T7W0 954 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 DPY19L2P1Q6NXN4 242 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 NRAPQ86VF7 1730 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 COL23A1Q86Y22 540 aaPredicted RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 DNAJC5GQ8N7S2 189 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 SARAFQ96BY9 339 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 SUCLG2Q96I99 432 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 METTL14Q9HCE5 456 aaKnown RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 GOLGA6AQ9NYA3 693 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 NDRG4Q9ULP0 352 aaKnown RBP4.93□□□□□ -1.62
NUP88-202ENST00000570937 EP400Q96L91 3159 aa4.93□□□□□ -1.62
NUP88-202ENST00000570937 LMO7Q8WWI1 1683 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 INSRP06213 1382 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 PCSK5Q92824 1860 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 ISM1B1AKI9 464 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 MYO1CO00159 1063 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 PPM1DO15297 605 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 SLC16A3O15427 465 aaKnown RBP4.92□□□□□ -1.62
NUP88-202ENST00000570937 MARCH6O60337 910 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 TLR5O60602 858 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 TTLL1O95922 423 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 NR2F6P10588 404 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 CACNB3P54284 484 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 SATB1Q01826 763 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 SLC13A2Q13183 592 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 E2F2Q14209 437 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 GFOD2Q3B7J2 385 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 ARHGAP40Q5TG30 622 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 SYCE2Q6PIF2 218 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 APOA5Q6Q788 366 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 ZNF551Q7Z340 670 aaPredicted RBP4.92□□□□□ -1.62
NUP88-202ENST00000570937 SRGAP1Q7Z6B7 1085 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 SLC15A4Q8N697 577 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 ASB6Q9NWX5 421 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 DKK3Q9UBP4 350 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 POLKQ9UBT6 870 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 SH2B3Q9UQQ2 575 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 USP54Q70EL1 1684 aa4.92□□□□□ -1.62
NUP88-202ENST00000570937 OVOS2A0A0G2JMS6 1433 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 TBX3O15119 743 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 ONECUT2O95948 504 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 ZBED1O96006 694 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 C1RP00736 705 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 CD38P28907 300 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms