RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 GTPBP4Q9BZE4 634 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 NACA2Q9H009 215 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 COMMD8Q9NX08 183 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 GMIPQ9P107 970 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 CFAP97Q9P2B7 532 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 SLC8A2Q9UPR5 921 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 OBSL1O75147 1896 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 LCE2BO14633 110 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 SCAMP3O14828 347 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 COCHO43405 550 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 ADORA2BP29275 332 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 HOXA6P31267 233 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 TUBP50607 506 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZXDBP98169 803 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 SIM2Q14190 667 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZNF658Q5TYW1 1059 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 LAIR1Q6GTX8 287 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 ACDQ96AP0 544 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 EPAS1Q99814 870 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 SMOQ99835 787 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 FBRSL1Q9HCM7 1045 aaKnown RBP13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.32
CTDNEP1-205ENST00000570828 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 CILPO75339 1184 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 ADH1CP00326 375 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 CYP17A1P05093 508 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 PRCPP42785 496 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 STIM1Q13586 685 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 COBLL1Q53SF7 1204 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 DCAF17Q5H9S7 520 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 TCERG1LQ5VWI1 586 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 SNX30Q5VWJ9 437 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 CEP68Q76N32 757 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 WDR5BQ86VZ2 330 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 FBXL13Q8NEE6 735 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 RPLP0P6Q8NHW5 317 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 JAKMIP2Q96AA8 810 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 TWNKQ96RR1 684 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 CCSER2Q9H7U1 834 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 CSNK1G1Q9HCP0 422 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 TBC1D14Q9P2M4 693 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 SH3BP1Q9Y3L3 701 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 PTPRDP23468 1912 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
CTDNEP1-205ENST00000570828 E2F8A0AVK6 867 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 PSMA7O14818 248 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 TLR5O60602 858 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 BEST1O76090 585 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 CLEC20AQ6ZU45 233 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 TTC39CQ8N584 583 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 ERCC4Q92889 916 aaPredicted RBP13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 RMDN1Q96DB5 314 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 FAXDC2Q96IV6 333 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 PNPLA8Q9NP80 782 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 TLR8Q9NR97 1041 aaKnown RBP13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 RAB20Q9NX57 234 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 PCDHA5Q9Y5H7 936 aa13.06□□□□□ -0.32
CTDNEP1-205ENST00000570828 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 CCDC163A0A0D9SF12 145 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 CYP26A1O43174 497 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 RETP07949 1114 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 IRF1P10914 325 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 ADH5P11766 374 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 ACO1P21399 889 aaKnown RBP13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 OPRD1P41143 372 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 FOXK2Q01167 660 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 LMNB2Q03252 620 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 GOLGA8FQ08AF8 430 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 GOLGA8DPQ0D2H9 430 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 DHCR24Q15392 516 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 SYT13Q7L8C5 426 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 ERMP1Q7Z2K6 904 aa13.05□□□□□ -0.32
CTDNEP1-205ENST00000570828 GPRIN1Q7Z2K8 1008 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms