RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CSH1P0DML2 217 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 CSH2P0DML3 217 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 GPD1P21695 349 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 PSMA2P25787 234 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 FLT3P36888 993 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 ETF1P62495 437 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 TAF12Q16514 161 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 PM20D1Q6GTS8 502 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 GPR153Q6NV75 609 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 HFE2Q6ZVN8 426 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 ADGRD2Q7Z7M1 963 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 LRRC57Q8N9N7 239 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 RXFP2Q8WXD0 754 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 ZNF576Q9H609 170 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 MAN1C1Q9NR34 630 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 IP6K2Q9UHH9 426 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 SCML2Q9UQR0 700 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 PER2O15055 1255 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 PROSCO94903 275 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 TNNT1P13805 278 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 PDGFRAP16234 1089 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 EPCAMP16422 314 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 YWHAZP63104 245 aaKnown RBP16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 OGDHQ02218 1023 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 BHLHA9Q7RTU4 235 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 RBM23Q86U06 439 aaKnown RBP16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 KHSRPQ92945 711 aaKnown RBP eCLIP16.15■□□□□ 0.182e-11■■□□□ 11.7
HERPUD1-219ENST00000570273 MRPL38Q96DV4 380 aaKnown RBP16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 WDR24Q96S15 920 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 TRIM62Q9BVG3 475 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 TLE6Q9H808 572 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 IL37Q9NZH6 218 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 EHD2Q9NZN4 543 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 GMIPQ9P107 970 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
HERPUD1-219ENST00000570273 TRANK1O15050 2925 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 A0A1W2PQH9 124 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 DPYSL4O14531 572 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 CAPN9O14815 690 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 SPOPO43791 374 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 C1RP00736 705 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 DESP17661 470 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 SDC4P31431 198 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 MAN1A1P33908 653 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 NRIP1P48552 1158 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 ZNF252P-AS1Q0IIN9 211 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 PPM1LQ5SGD2 360 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 TRNP1Q6NT89 227 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 ELMSAN1Q6PJG2 1045 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 SYT10Q6XYQ8 523 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 ITIH5Q86UX2 942 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 DEFB106AQ8N104 65 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 ARHGAP18Q8N392 663 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 FNIP1Q8TF40 1166 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 SLC22A17Q8WUG5 538 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 PPP2R3CQ969Q6 453 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 SLC2A13Q96QE2 648 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 POPDC2Q9HBU9 364 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 DNAI1Q9UI46 699 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 USTQ9Y2C2 406 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 PLXNA3P51805 1871 aa16.14■□□□□ 0.17
HERPUD1-219ENST00000570273 FAM92AA1XBS5 289 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 TUBB4AP04350 444 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 COMTP21964 271 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 ZNF143P52747 638 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 TAF10Q12962 218 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 PIGHQ14442 188 aaPredicted RBP16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 DUSP6Q16828 381 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 DCAF6Q58WW2 860 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 BSPRYQ5W0U4 402 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 BTBD8Q5XKL5 378 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 ARCQ7LC44 396 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 SLFN11Q7Z7L1 901 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 SCD5Q86SK9 330 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 CPNE8Q86YQ8 564 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 ELMOD1Q8N336 334 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 EDEM1Q92611 657 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 CFAP57Q96MR6 1250 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 SLITRK1Q96PX8 696 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 CNPY3Q9BT09 278 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 DDX23Q9BUQ8 820 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 PLEKHA4Q9H4M7 779 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 AMFRQ9UKV5 643 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 STAP1Q9ULZ2 295 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 ASB3Q9Y575 518 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 ALG6Q9Y672 507 aa16.13■□□□□ 0.17
HERPUD1-219ENST00000570273 TMEM265A0A087WTH1 108 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 ZMYND10O75800 440 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 NCAM1P13591 858 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 HMGA1P17096 107 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 CASQ1P31415 396 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms