RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 HOXD11P31277 338 aaPredicted RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 DEUP1Q05D60 604 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 WSCD1Q658N2 575 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 ZNF771Q7L3S4 317 aaPredicted RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 PDIK1LQ8N165 341 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 FAM172AQ8WUF8 416 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 AAASQ9NRG9 546 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 KRT82Q9NSB4 513 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 TPX2Q9ULW0 747 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 SNX24Q9Y343 169 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SF3B1O75533 1304 aaKnown RBP eCLIP6.29□□□□□ -1.49e-6■■■■■ 68.9
CYLD-216ENST00000569891 E7EVH7 732 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 MIPP30301 263 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CARSP49589 748 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 RGS7P49802 495 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 EIF3EP60228 445 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 MRPS5P82675 430 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 STAT4Q14765 748 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 PDK1Q15118 436 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SLC25A52Q3SY17 297 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 KRT71Q3SY84 523 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 MDH1BQ5I0G3 518 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 INTS6LQ5JSJ4 861 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 CEP85LQ5SZL2 805 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 ZMAT2Q96NC0 199 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 DDX23Q9BUQ8 820 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 CENPHQ9H3R5 247 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 PCDHB5Q9Y5E4 795 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 GABRDO14764 452 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CST8O60676 142 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 PFKMP08237 780 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 TAF12Q16514 161 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 P3H1Q32P28 736 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 ZNF618Q5T7W0 954 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 BTBD8Q5XKL5 378 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CCSAPQ6IQ19 270 aaPredicted RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 MICALCLQ6ZW33 695 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 PHLDB2Q86SQ0 1253 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 FAM35AQ86V20 835 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 NPAS4Q8IUM7 802 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CMASQ8NFW8 434 aaPredicted RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 NSMCE1Q8WV22 266 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 TMEM40Q8WWA1 233 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SENP1Q9P0U3 644 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SCN10AQ9Y5Y9 1956 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SPDYE4A6NLX3 237 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 POLR3GO15318 223 aaPredicted RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 RGS16O15492 202 aaPredicted RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 RNF40O75150 1001 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 ZMYND10O75800 440 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 IFNB1P01574 187 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 VEGFBP49765 207 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 TKTL1P51854 596 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 RPL7AP62424 266 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 ILF2Q12905 390 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 SNX1Q13596 522 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 PRPSAP1Q14558 356 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 CDO1Q16878 200 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 IZUMO3Q5VZ72 239 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 ANKS3Q6ZW76 656 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 CCDC25Q86WR0 208 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 LRRC49Q8IUZ0 686 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 PPIL6Q8IXY8 311 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 LZTR1Q8N653 840 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 C1orf54Q8WWF1 131 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 WNT8BQ93098 351 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 TOX2Q96NM4 488 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 HEMGNQ9BXL5 484 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 NSRP1Q9H0G5 558 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
CYLD-216ENST00000569891 PCSK1NQ9UHG2 260 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 FAN1Q9Y2M0 1017 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 F8VP50 259 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 PPFIA2O75334 1257 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 LRCH4O75427 683 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 TFRCP02786 760 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 SRGAP2BP0DMP2 458 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 FDFT1P37268 417 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 OR1G1P47890 313 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 IKBKEQ14164 716 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 SEPT7Q16181 437 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 ITPRIPL1Q6GPH6 555 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 PIGZQ86VD9 579 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 OLIG1Q8TAK6 271 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 TMEM106CQ9BVX2 250 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 RNF208Q9H0X6 261 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 MTIF3Q9H2K0 278 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 DHX35Q9H5Z1 703 aaKnown RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 ABCC13Q9NSE7 274 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 PRKAG2Q9UGJ0 569 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 ATP8A1Q9Y2Q0 1164 aa6.28□□□□□ -1.4
CYLD-216ENST00000569891 A0A087WUV0 522 aaPredicted RBP6.28□□□□□ -1.4
CYLD-216ENST00000569891 CASTOR2A6NHX0 329 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms