RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GRIA2P42262 883 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 RPL6Q02878 288 aaKnown RBP12.82□□□□□ -0.36
CAPN3-220ENST00000569827 CYP24A1Q07973 514 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 C10orf76Q5T2E6 689 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 EGFLAMQ63HQ2 1017 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 FAM35AQ86V20 835 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 TMEM25Q86YD3 366 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 ZNF513Q8N8E2 541 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-220ENST00000569827 KDF1Q8NAX2 398 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-220ENST00000569827 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 PLEKHO2Q8TD55 490 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 BHMTQ93088 406 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 DHX58Q96C10 678 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 ELOVL4Q9GZR5 314 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 BLZF1Q9H2G9 400 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPN3-220ENST00000569827 AGPAT3Q9NRZ7 376 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 CALCOCO1Q9P1Z2 691 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 EVLQ9UI08 416 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-220ENST00000569827 RAD54BQ9Y620 910 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 SRRM3A6NNA2 597 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-220ENST00000569827 TNFRSF10BO14763 440 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 TACC1O75410 805 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 CCDC130P13994 396 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 HOXB2P14652 356 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 SLC5A3P53794 718 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 SIM1P81133 766 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-220ENST00000569827 CUL4AQ13619 759 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 SURF1Q15526 300 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 E2F4Q16254 413 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 FAM26FQ5R3K3 315 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 PAQR9Q6ZVX9 377 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-220ENST00000569827 ETFBKMTQ8IXQ9 262 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 CAMK1GQ96NX5 476 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 XYLT2Q9H1B5 865 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 KRT82Q9NSB4 513 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 HMGXB4Q9UGU5 601 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 CYP8B1Q9UNU6 501 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 SH3BP1Q9Y3L3 701 aa12.81□□□□□ -0.36
CAPN3-220ENST00000569827 MDM4O15151 490 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 BEST1O76090 585 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 TBX18O95935 607 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 PFKLP17858 780 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 EIF2DP41214 584 aaKnown RBP12.8□□□□□ -0.36
CAPN3-220ENST00000569827 GAD2Q05329 585 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 LMAN2Q12907 356 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 BIRC3Q13489 604 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 TRPC3Q13507 836 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 PSMD6Q15008 389 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 SLC39A14Q15043 492 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 STK38Q15208 465 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-220ENST00000569827 HECTD3Q5T447 861 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 FOXD4L5Q5VV16 416 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-220ENST00000569827 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-220ENST00000569827 TOGARAM2Q6ZUX3 1019 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 STXBP4Q6ZWJ1 553 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 ACOT1Q86TX2 421 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 SLC41A1Q8IVJ1 513 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 TERB1Q8NA31 727 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 SCFD1Q8WVM8 642 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 FOXD4L4Q8WXT5 416 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-220ENST00000569827 EHD2Q9NZN4 543 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 TFIP11Q9UBB9 837 aaKnown RBP12.8□□□□□ -0.36
CAPN3-220ENST00000569827 NUDT5Q9UKK9 219 aa12.8□□□□□ -0.36
CAPN3-220ENST00000569827 IGHV1OR15-9A0A0B4J2B8 117 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 E2F8A0AVK6 867 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 KIAA0391O15091 583 aaKnown RBP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 PHACTR2O75167 634 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 AP1G2O75843 785 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 NDUFV2P19404 249 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 PPP3CCP48454 512 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 ATXN3P54252 364 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 BTBD8Q5XKL5 378 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 SLC23A3Q6PIS1 610 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 TPGS1Q6ZTW0 290 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 GPRIN1Q7Z2K8 1008 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 PIP4P1Q86T03 277 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 CHCHD4Q8N4Q1 142 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 MINDY1Q8N5J2 469 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 XXYLT1Q8NBI6 393 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 ZNF507Q8TCN5 953 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 P2RY11Q96G91 374 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 HSPA12BQ96MM6 686 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms