RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
SHCBP1-207ENST00000569702 CLIC5Q9NZA1 410 aa11.67□□□□□ -0.54
SHCBP1-207ENST00000569702 HESX1Q9UBX0 185 aa11.67□□□□□ -0.54
SHCBP1-207ENST00000569702 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHCBP1-207ENST00000569702 MRPS17Q9Y2R5 130 aaKnown RBP11.67□□□□□ -0.54
SHCBP1-207ENST00000569702 HELZP42694 1942 aaKnown RBP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 A0A1W2PQH9 124 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 BECN2A8MW95 431 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 SPECC1L-ADORA2AF8WAN1 911 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 TLR5O60602 858 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 TBX18O95935 607 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 CALCAP01258 141 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 MBL2P11226 248 aaPredicted RBP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 ARSAP15289 507 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 BRD2P25440 801 aaKnown RBP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 CTHP32929 405 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 SOX9P48436 509 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 KPNA1P52294 538 aaPredicted RBP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 MYL5Q02045 173 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 KCNMA1Q12791 1236 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 NCAPHQ15003 741 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 KLHL40Q2TBA0 621 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 EML3Q32P44 896 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 KLHDC10Q6PID8 442 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 TXNDC11Q6PKC3 985 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 DDX42Q86XP3 938 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 TTC8Q8TAM2 541 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 UBA3Q8TBC4 463 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 KCTD13Q8WZ19 329 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 SHC3Q92529 594 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 CHFRQ96EP1 664 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 LINC00597Q9H2U6 94 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 DUS2Q9NX74 493 aaKnown RBP11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 SMPD4Q9NXE4 827 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 VPS13AQ96RL7 3174 aa11.66□□□□□ -0.54
SHCBP1-207ENST00000569702 DMDP11532 3685 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 LRRC10BA6NIK2 292 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 NCAM2O15394 837 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 GABBR2O75899 941 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ZBED1O96006 694 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 CHRNB1P11230 501 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 RARGP13631 454 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 KRT5P13647 590 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ZNF18P17022 549 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ATP5C1P36542 298 aaKnown RBP11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 MAGEA9P43362 315 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 RPS9P46781 194 aaKnown RBP11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 TKTL1P51854 596 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 KRT31Q15323 416 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 MEA1Q16626 185 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ARHGAP44Q17R89 818 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 PMF1Q6P1K2 205 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 BHLHA9Q7RTU4 235 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ADGRG2Q8IZP9 1017 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 SCML4Q8N228 414 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ATP2A3Q93084 1043 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 HSD3B7Q9H2F3 369 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 ECT2Q9H8V3 914 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 DNAJC12Q9UKB3 198 aa11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 AJAP1Q9UKB5 411 aaPredicted RBP11.65□□□□□ -0.54
SHCBP1-207ENST00000569702 MIA3Q5JRA6 1907 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 MYO16Q9Y6X6 1858 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 E2F8A0AVK6 867 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 M0QYV0 167 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 GREM1O60565 184 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 GJA4P35212 333 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 GPD2P43304 727 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 IFNAR2P48551 515 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 RPL34P49207 117 aaKnown RBP11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 PTPN5P54829 565 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 ADIGQ0VDE8 80 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 KLHDC7AQ5VTJ3 777 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 CPA6Q8N4T0 437 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 TTC16Q8NEE8 873 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 ZNF606Q8WXB4 792 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 SECISBP2LQ93073 1101 aaKnown RBP11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 WBP2Q969T9 261 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 HSFY1Q96LI6 401 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 BPIFA3Q9BQP9 254 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 FUCA2Q9BTY2 467 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 NAA15Q9BXJ9 866 aaKnown RBP11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 KLF16Q9BXK1 252 aaPredicted RBP11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 ULBP1Q9BZM6 244 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 VPS16Q9H269 839 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 LRRC4Q9HBW1 653 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 ACP6Q9NPH0 428 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 CNGB3Q9NQW8 809 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 LIMA1Q9UHB6 759 aaKnown RBP11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 NDRG2Q9UN36 371 aaKnown RBP11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 MYO15AQ9UKN7 3530 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 CACNA1IQ9P0X4 2223 aa11.64□□□□□ -0.55
SHCBP1-207ENST00000569702 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms