RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CPQQ9Y646 472 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 WNT6Q9Y6F9 365 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 CACNA1HO95180 2353 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 LEFTY2O00292 366 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 SP9P0CG40 484 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 ACO1P21399 889 aaKnown RBP15.27■□□□□ 0.04
COMMD4-225ENST00000569245 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-225ENST00000569245 SLC7A9P82251 487 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 CSTF1Q05048 431 aaKnown RBP15.27■□□□□ 0.04
COMMD4-225ENST00000569245 KCNMA1Q12791 1236 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 MTAPQ13126 283 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 FZD5Q13467 585 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 SYCP1Q15431 976 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 PPP1R26Q5T8A7 1209 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-225ENST00000569245 CLEC20AQ6ZU45 233 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 TMC6Q7Z403 805 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 CPA6Q8N4T0 437 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 ATP2A3Q93084 1043 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 NT5C1BQ96P26 610 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 DUSP16Q9BY84 665 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 HPS4Q9NQG7 708 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 IMPACTQ9P2X3 320 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 SIK3Q9Y2K2 1263 aa15.27■□□□□ 0.04
COMMD4-225ENST00000569245 OTOL1A6NHN0 477 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 OAS1P00973 400 aaKnown RBP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 CHRNB1P11230 501 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 TBXAS1P24557 533 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 NBL1P41271 181 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 RAD23BP54727 409 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 SLC8A3P57103 927 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 USP4Q13107 963 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 NR1H3Q13133 447 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 FIGNQ5HY92 759 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 DRC7Q8IY82 874 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 ZNF687Q8N1G0 1237 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 IQCDQ96DY2 449 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 NUP58Q9BVL2 599 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 LINC00597Q9H2U6 94 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 FAM124BQ9H5Z6 455 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 TLR8Q9NR97 1041 aaKnown RBP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 RBM12Q9NTZ6 932 aaKnown RBP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 IL37Q9NZH6 218 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
COMMD4-225ENST00000569245 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.26■□□□□ 0.03
COMMD4-225ENST00000569245 SCAMP3O14828 347 aaKnown RBP15.25■□□□□ 0.03
COMMD4-225ENST00000569245 COCHO43405 550 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 CD19P15391 556 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 TCF3P15923 654 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 GRSF1Q12849 480 aaKnown RBP eCLIP15.25■□□□□ 0.03
COMMD4-225ENST00000569245 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-225ENST00000569245 TRIM14Q14142 442 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 PPP2R5DQ14738 602 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 EXOC3L4Q17RC7 722 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 DGKKQ5KSL6 1271 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 DPY19L2P1Q6NXN4 242 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 ZC3H14Q6PJT7 736 aaKnown RBP15.25■□□□□ 0.03
COMMD4-225ENST00000569245 GPRIN1Q7Z2K8 1008 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 DDX42Q86XP3 938 aaKnown RBP eCLIP15.25■□□□□ 0.03
COMMD4-225ENST00000569245 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 EXOC4Q96A65 974 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 CHRDQ9H2X0 955 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 CCSER2Q9H7U1 834 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 ECT2Q9H8V3 914 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 PLCB1Q9NQ66 1216 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 FBXO4Q9UKT5 387 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 SCML2Q9UQR0 700 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 R4GN57 208 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 PIEZO1Q92508 2521 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 F5P12259 2224 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 VPS13AQ96RL7 3174 aa15.25■□□□□ 0.03
COMMD4-225ENST00000569245 ZFHX2Q9C0A1 2572 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-225ENST00000569245 FAM92AA1XBS5 289 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 SLC9A3R1O14745 358 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-225ENST00000569245 CYP26A1O43174 497 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 GFRA3O60609 400 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 NFATC1O95644 943 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 OLFM2O95897 454 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 PON1P27169 355 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 TUBP50607 506 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 ZXDBP98169 803 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 EML3Q32P44 896 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 SGO2Q562F6 1265 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 SNX30Q5VWJ9 437 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 TSSK4Q6SA08 328 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 MAML2Q8IZL2 1156 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-225ENST00000569245 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 LMO3Q8TAP4 145 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 NKD2Q969F2 451 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-225ENST00000569245 CRACR2AQ9BSW2 395 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 IER2Q9BTL4 223 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 EDEM3Q9BZQ6 932 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 PNPLA8Q9NP80 782 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 SH3BP1Q9Y3L3 701 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 DAAM1Q9Y4D1 1078 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 PCDHB4Q9Y5E5 795 aa15.24■□□□□ 0.03
COMMD4-225ENST00000569245 NUP210Q8TEM1 1887 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-225ENST00000569245 TICRRQ7Z2Z1 1910 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms