RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	NLRP7	Q8WX94	980 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	COPS5	Q92905	334 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	WDR83	Q9BRX9	315 aa	Known RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883	TSSK1B	Q9BXA7	367 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	RNPEP	Q9H4A4	650 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	VTA1	Q9NP79	307 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	C15orf41	Q9Y2V0	281 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	MTO1	Q9Y2Z2	717 aa	Known RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883		E7ENQ6	273 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	HGS	O14964	777 aa	Predicted RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883	KCNN4	O15554	427 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	ANP32D	O95626	131 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	SLC6A3	Q01959	620 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	ARHGAP1	Q07960	439 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	MMRN1	Q13201	1228 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	SLC9A4	Q6AI14	798 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	SCYL2	Q6P3W7	929 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	C1orf228	Q6PIY5	440 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	TAB3	Q8N5C8	712 aa	Predicted RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883	PLD5	Q8N7P1	536 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	ANKLE1	Q8NAG6	615 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	MCU	Q8NE86	351 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	PPTC7	Q8NI37	304 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	SH3TC2	Q8TF17	1288 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	EMID1	Q96A84	441 aa	Predicted RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883	MTBP	Q96DY7	904 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	KIF12	Q96FN5	646 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	PRDM16	Q9HAZ2	1276 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	TXNRD2	Q9NNW7	524 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	NPHS2	Q9NP85	383 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	LNPEP	Q9UIQ6	1025 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	COPE	O14579	308 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	KLF11	O14901	512 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	ECM2	O94769	699 aa	Predicted RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	SNRPA	P09012	282 aa	Known RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	DHRS4L1	P0CG22	281 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CYP2C8	P10632	490 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	TARS	P26639	723 aa	Known RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	PTPN4	P29074	926 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	SCNN1A	P37088	669 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	NR2C2	P49116	596 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	NEK3	P51956	506 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CCNA1	P78396	465 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CDC42EP1	Q00587	391 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CDO1	Q16878	200 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	KBTBD12	Q3ZCT8	623 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CCDC14	Q49A88	953 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	WASHC2D	Q5SRD0	308 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	MAP1S	Q66K74	1059 aa	Predicted RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	NPNT	Q6UXI9	565 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	ARMCX2	Q7L311	632 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	UNC93A	Q86WB7	457 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	LRRC6	Q86X45	466 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	FAM172A	Q8WUF8	416 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	N4BP2L2	Q92802	583 aa	Predicted RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	THOC1	Q96FV9	657 aa	Known RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	CPB2	Q96IY4	423 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	SLC4A5	Q9BY07	1137 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	USP29	Q9HBJ7	922 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	PCDH18	Q9HCL0	1135 aa		13.18	□□□□□ -0.3
PKM-222	ENST00000568883	NGRN	Q9NPE2	291 aa	Known RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.18	□□□□□ -0.3
PKM-222	ENST00000568883		A6NJR5	290 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	ADM5	C9JUS6	153 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	TSPAN1	O60635	241 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	KRT38	O76015	456 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	LMNA	P02545	664 aa	Known RBP	13.17	□□□□□ -0.3
PKM-222	ENST00000568883	ARFIP2	P53365	341 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	SLC8A3	P57103	927 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	YWHAZ	P63104	245 aa	Known RBP	13.17	□□□□□ -0.3
PKM-222	ENST00000568883	SARNP	P82979	210 aa	Known RBP	13.17	□□□□□ -0.3
PKM-222	ENST00000568883	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.17	□□□□□ -0.3
PKM-222	ENST00000568883	TAF1B	Q53T94	588 aa	Predicted RBP	13.17	□□□□□ -0.3
PKM-222	ENST00000568883	MTHFD1L	Q6UB35	978 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	OLFML1	Q6UWY5	402 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.17	□□□□□ -0.3
PKM-222	ENST00000568883	TMEM110	Q86TL2	294 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	VPS52	Q8N1B4	723 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	LRRC52	Q8N7C0	313 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	CFAP61	Q8NHU2	1237 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	STAMBPL1	Q96FJ0	436 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	ETNK2	Q9NVF9	386 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	MKS1	Q9NXB0	559 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	HAO1	Q9UJM8	370 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	TRIM33	Q9UPN9	1127 aa		13.17	□□□□□ -0.3
PKM-222	ENST00000568883	WDR91	A4D1P6	747 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883		I3L4J1	428 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	GOLGA8R	I6L899	631 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	DNAJC6	O75061	913 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF189	O75820	626 aa	Predicted RBP	13.16	□□□□□ -0.3
PKM-222	ENST00000568883	HAUS5	O94927	633 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	TPSB2	P20231	275 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	PRKCH	P24723	683 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	PTPN9	P43378	593 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	SERPINB9	P50453	376 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	FAAP100	Q0VG06	881 aa		13.16	□□□□□ -0.3
PKM-222	ENST00000568883	TTLL12	Q14166	644 aa	Predicted RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms