RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 FANCLQ9NW38 375 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 STRIP2Q9ULQ0 834 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FRMD4BQ9Y2L6 1034 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 RPS6KL1Q9Y6S9 549 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 PTPRDP23468 1912 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SPTBN4Q9H254 2564 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 VPS13AQ96RL7 3174 aa4.96□□□□□ -1.61
HERPUD1-213ENST00000568358 COL4A3Q01955 1670 aa4.96□□□□□ -1.61
HERPUD1-213ENST00000568358 HELZP42694 1942 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 A0A087X0B3 334 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 SHISA7A6NL88 538 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 A8MXQ7 604 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 TRDMT1O14717 391 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ATP2C2O75185 946 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 TACC1O75410 805 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 NOL4O94818 638 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 RTN3O95197 1032 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PAPSS2O95340 614 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PRAMEF12O95522 483 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 NFATC1O95644 943 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 F13A1P00488 732 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 HMGA1P17096 107 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 JUNDP17535 347 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PTPN1P18031 435 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 WARSP23381 471 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 LMO2P25791 158 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 HOXA6P31267 233 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 NOS2P35228 1153 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 GNALP38405 381 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 GPR15P49685 360 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 GALK1P51570 392 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PSMC1P62191 440 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CYP24A1Q07973 514 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 SPEM2Q0P670 501 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 USP4Q13107 963 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 BIRC3Q13489 604 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CCINQ13939 588 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 MTF1Q14872 753 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PSMD6Q15008 389 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 LPAL2Q16609 132 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 KNOP1Q1ED39 458 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PREPLQ4J6C6 727 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ZNF667Q5HYK9 610 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 TMEM196Q5HYL7 178 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 MDH1BQ5I0G3 518 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 TRIM68Q6AZZ1 485 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CNNM4Q6P4Q7 775 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 SHC4Q6S5L8 630 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CACNA2D4Q7Z3S7 1137 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 WDR5BQ86VZ2 330 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 DDX42Q86XP3 938 aaKnown RBP eCLIP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CBWD2Q8IUF1 395 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 LILRB2Q8N423 598 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CAMKK1Q8N5S9 505 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ARL14EPQ8N8R7 260 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 C12orf50Q8NA57 414 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CCDC150Q8NCX0 1101 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 OR5B17Q8NGF7 314 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 SH3RF2Q8TEC5 729 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 OSCP1Q8WVF1 389 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 DDX1Q92499 740 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CD101Q93033 1021 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 HPS3Q969F9 1004 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ACDQ96AP0 544 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 TNIP3Q96KP6 325 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 LRRC3BQ96PB8 259 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CYP2S1Q96SQ9 504 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CGRRF1Q99675 332 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 P2RY13Q9BPV8 354 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 FAM83CQ9BQN1 747 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 MED10Q9BTT4 135 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ELOVL4Q9GZR5 314 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 NACA2Q9H009 215 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 BLZF1Q9H2G9 400 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ECT2Q9H8V3 914 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 SLC39A2Q9NP94 309 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 AGPAT3Q9NRZ7 376 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 EXOC1Q9NV70 894 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 EVA1BQ9NVM1 165 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 TBC1D14Q9P2M4 693 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 NXF1Q9UBU9 619 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 USP25Q9UHP3 1055 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 SIX4Q9UIU6 781 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 GGT7Q9UJ14 662 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 PCDHA7Q9UN72 937 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 CCL26Q9Y258 94 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 ATP6V1DQ9Y5K8 247 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 OTOGLQ3ZCN5 2332 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 NUP205Q92621 2012 aa4.96□□□□□ -1.62
HERPUD1-213ENST00000568358 COL4A2P08572 1712 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 CCDC163A0A0D9SF12 145 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 C2orf78A6NCI8 922 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 TMEM229AB2RXF0 380 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 F8VP50 259 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 AXIN1O15169 862 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 TGFB1I1O43294 461 aa4.95□□□□□ -1.62
HERPUD1-213ENST00000568358 SH3BP5O60239 455 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms