RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 F8VZ95 297 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 O00370 1275 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 AP1G2O75843 785 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 SETSIPP0DME0 302 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 CD19P15391 556 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 ATF6P18850 670 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 GDI1P31150 447 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 PBX1P40424 430 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 JAM2P57087 298 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 RAPGEF1Q13905 1077 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 DDR2Q16832 855 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 DENND5BQ6ZUT9 1274 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 GAREM2Q75VX8 874 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 CACNA2D4Q7Z3S7 1137 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 ZNF677Q86XU0 584 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 NUP93Q8N1F7 819 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 ZNF397Q8NF99 534 aaPredicted RBP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 KIAA1524Q8TCG1 905 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 OVCA2Q8WZ82 227 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 LPIN3Q9BQK8 851 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 TRMT61BQ9BVS5 477 aaKnown RBP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 TTLL2Q9BWV7 592 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 XPO4Q9C0E2 1151 aaKnown RBP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 BRD9Q9H8M2 597 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 SPATA6Q9NWH7 488 aaPredicted RBP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01228-201ENST00000567966 FHOD1Q9Y613 1164 aa11.66□□□□□ -0.54
LINC01228-201ENST00000567966 ITIH6Q6UXX5 1313 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 FAM92AA1XBS5 289 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SLC38A8A6NNN8 435 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 HEPACAM2A8MVW5 462 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CLDN5O00501 218 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 TNFRSF10BO14763 440 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CYP26A1O43174 497 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CCDC130P13994 396 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 HMGA1P17096 107 aaKnown RBP11.65□□□□□ -0.54
LINC01228-201ENST00000567966 PFKLP17858 780 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 WEE1P30291 646 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CDC25CP30307 473 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SOX5P35711 763 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 USP8P40818 1118 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 TERF1P54274 439 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 BCAT1P54687 386 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SNX16P57768 344 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 APBA1Q02410 837 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 ORC1Q13415 861 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 DSG2Q14126 1118 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 PKDCCQ504Y2 493 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 LRRC8AQ8IWT6 810 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 ZNF687Q8N1G0 1237 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 GIPC2Q8TF65 315 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SLC35F5Q8WV83 523 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 KCTD13Q8WZ19 329 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 TFAP2BQ92481 460 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CLDN23Q96B33 292 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 HSFY1Q96LI6 401 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 KCNK16Q96T55 309 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SMOQ99835 787 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SLITRK6Q9H5Y7 841 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CYLDQ9NQC7 956 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 FAM49BQ9NUQ9 324 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 SPTLC3Q9NUV7 552 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 AIPL1Q9NZN9 384 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 TSPAN16Q9UKR8 245 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 NDRG2Q9UN36 371 aaKnown RBP11.65□□□□□ -0.54
LINC01228-201ENST00000567966 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
LINC01228-201ENST00000567966 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC01228-201ENST00000567966 CACNA1IQ9P0X4 2223 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 ZFHX2Q9C0A1 2572 aaPredicted RBP11.64□□□□□ -0.55
LINC01228-201ENST00000567966 XPO1O14980 1071 aaKnown RBP11.64□□□□□ -0.55
LINC01228-201ENST00000567966 CYP11B1P15538 503 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 FERP16591 822 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 PSMC3P17980 439 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 DDX6P26196 483 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01228-201ENST00000567966 YWHAQP27348 245 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 GABRR2P28476 465 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 ADORA2BP29275 332 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 GNA15P30679 374 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 KRT9P35527 623 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 PLA2G4AP47712 749 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 KLK7P49862 253 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 MAP3K7CLP57077 242 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 CYP4F8P98187 520 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 BST2Q10589 180 aaKnown RBP11.64□□□□□ -0.55
LINC01228-201ENST00000567966 TRIM14Q14142 442 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 CCDC142Q17RM4 750 aa11.64□□□□□ -0.55
LINC01228-201ENST00000567966 SPECC1LQ69YQ0 1117 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms