RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PRUNE2Q8WUY3 3088 aa5.77□□□□□ -1.49
CAPN3-217ENST00000567817 A0A087X0B3 334 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 KLRF2D3W0D1 207 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 EIF3JO75822 258 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 GYPCP04921 128 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 ZNF20P17024 532 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CR2P20023 1033 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CCNE1P24864 410 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 KLRK1P26718 216 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 KRT9P35527 623 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CYLC1P35663 651 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 BTDP43251 543 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 RBM5P52756 815 aaKnown RBP eCLIP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 NAPAP54920 295 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 ADKP55263 362 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 SESN2P58004 480 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 MRPS5P82675 430 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 OCRLQ01968 901 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 UBXN1Q04323 297 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 LRRC63Q05C16 580 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CKAP4Q07065 602 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TRAF1Q13077 416 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 PDIA5Q14554 519 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TBR1Q16650 682 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 ERCC6LQ2NKX8 1250 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 FKBP15Q5T1M5 1219 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 GPATCH4Q5T3I0 446 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CCDC70Q6NSX1 233 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 DBX2Q6ZNG2 339 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TOGARAM2Q6ZUX3 1019 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 RSRC2Q7L4I2 434 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TAX1BP1Q86VP1 789 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 PASD1Q8IV76 773 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TEX11Q8IYF3 940 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 GRAMD1CQ8IYS0 662 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 NXPE1Q8N323 547 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 C7orf31Q8N865 590 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 MB21D1Q8N884 522 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 SH3RF3Q8TEJ3 882 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TGFBRAP1Q8WUH2 860 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 RUBCNQ92622 972 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 LPPQ93052 612 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CCDC17Q96LX7 622 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 ASB2Q96Q27 587 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 MED15Q96RN5 788 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TUBGCP5Q96RT8 1024 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 UHRF1Q96T88 793 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 NUP88Q99567 741 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 P2RX7Q99572 595 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 GPR20Q99678 358 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 NAPGQ99747 312 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CARD6Q9BX69 1037 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 EDEM3Q9BZQ6 932 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 RIOX1Q9H6W3 641 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 EXOC1Q9NV70 894 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TMOD2Q9NZR1 351 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 KCMF1Q9P0J7 381 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 H2AFY2Q9P0M6 372 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 SAE1Q9UBE0 346 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 ZNF70Q9UC06 446 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 PUF60Q9UHX1 559 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 CAPN11Q9UMQ6 739 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 LUC7L2Q9Y383 392 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 MGAMO43451 1857 aa5.76□□□□□ -1.49
CAPN3-217ENST00000567817 DDX60LQ5H9U9 1706 aaKnown RBP5.76□□□□□ -1.49
CAPN3-217ENST00000567817 FLT1P17948 1338 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 KDM3AQ9Y4C1 1321 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 LAMA2P24043 3122 aaKnown RBP5.75□□□□□ -1.49
CAPN3-217ENST00000567817 TLDC2A0PJX2 215 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 ANO9A1A5B4 782 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 CTAGE15A4D2H0 777 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 SMCO2A6NFE2 343 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 C1QTNF3-AMACRE9PGA6 284 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 KRT86O43790 486 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 NMT2O60551 498 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 ZRANB2O95218 330 aaKnown RBP eCLIP5.75□□□□□ -1.49
CAPN3-217ENST00000567817 GNA14O95837 355 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 HLA-DOAP06340 250 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 CTAGE8P0CG41 777 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 SNHG28P0DPA3 235 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 CYP2D6P10635 497 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 CD40P25942 277 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 CASP14P31944 242 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 PRCPP42785 496 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 SELENOPP49908 381 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 MRPL12P52815 198 aaKnown RBP5.75□□□□□ -1.49
CAPN3-217ENST00000567817 BCAR1P56945 870 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 STX17P56962 302 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 LRRC32Q14392 662 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 KARSQ15046 597 aaKnown RBP5.75□□□□□ -1.49
CAPN3-217ENST00000567817 PCBP1Q15365 356 aaKnown RBP eCLIP5.75□□□□□ -1.49
CAPN3-217ENST00000567817 SEPT7Q16181 437 aaKnown RBP5.75□□□□□ -1.49
CAPN3-217ENST00000567817 MEA1Q16626 185 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 DGKDQ16760 1214 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 FAM110CQ1W6H9 321 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 AAK1Q2M2I8 961 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 MAP9Q49MG5 647 aa5.75□□□□□ -1.49
CAPN3-217ENST00000567817 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms