RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ZBTB46Q86UZ6 589 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 IPMKQ8NFU5 416 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 KCNH7Q9NS40 1196 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 CFAP99D6REC4 459 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 EDF1O60869 148 aaKnown RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 MFN2O95140 757 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 PTPN7P35236 360 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 ORC1Q13415 861 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 FAM83EQ2M2I3 478 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 LNX1Q8TBB1 728 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 GANQ9H2C0 597 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 SP110Q9HB58 689 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 NSMCE4AQ9NXX6 385 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 ADGRB2O60241 1585 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 EEF2KO00418 725 aaKnown RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 C2CD2LO14523 706 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 PHGDHO43175 533 aaKnown RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZMPSTE24O75844 475 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 ETS1P14921 441 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 FGFR3P22607 806 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 KLRK1P26718 216 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 GALK1P51570 392 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 CHRNB3Q05901 458 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 RSBN1Q5VWQ0 802 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 STRA8Q7Z7C7 330 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 TSPAN14Q8NG11 270 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 KCTD10Q9H3F6 313 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 IGSF9BQ9UPX0 1349 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 FASP25445 335 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 ATP6V1E1P36543 226 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 RPS6KA3P51812 740 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 PCSK7Q16549 785 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 TAS2R42Q7RTR8 314 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 THUMPD3Q9BV44 507 aaKnown RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 ACP6Q9NPH0 428 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 CHST12Q9NRB3 414 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 COPG2Q9UBF2 871 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 AFF4Q9UHB7 1163 aaKnown RBP12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 SALL4Q9UJQ4 1053 aa12.8□□□□□ -0.36
CSPG4P13-202ENST00000567704 WNT7AO00755 349 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 PDGFRBP09619 1106 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 NR1H2P55055 460 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 C16orf46Q6P387 395 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 DPP9Q86TI2 863 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 KLHL23Q8NBE8 558 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ALG3Q92685 438 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 TMEM247A6NEH6 219 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 NR5A2O00482 541 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 XPAP23025 273 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 CNTFP26441 200 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZNF268Q14587 947 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 EMC2Q15006 297 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 KAT5Q92993 513 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 COQ7Q99807 217 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ARL8BQ9NVJ2 186 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ATP8B3O60423 1300 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 TYW5A2RUC4 315 aaKnown RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 SUPT3HB4E1H0 165 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 GJB6O95452 261 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 FDFT1P37268 417 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 OLFML1Q6UWY5 402 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 STKLD1Q8NE28 680 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 RMDN1Q96DB5 314 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 DGCR14Q96DF8 476 aaKnown RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 SEPHS2Q99611 448 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 BTNL10A8MVZ5 291 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 GSC2O15499 205 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 TIMM44O43615 452 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 CCDC130P13994 396 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 ULK2Q8IYT8 1036 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 UNKQ9C0B0 810 aaKnown RBP12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 PIF1Q9H611 641 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
CSPG4P13-202ENST00000567704 STAT5BP51692 787 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 BST1Q10588 318 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 SPP2Q13103 211 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 STILQ15468 1287 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 TJAP1Q5JTD0 557 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 GLRA4Q5JXX5 417 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 TAF2Q6P1X5 1199 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 RINLQ6ZS11 566 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms