RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TLR10Q9BXR5 811 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 TSGA10Q9BZW7 698 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 THAP2Q9H0W7 228 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 XYLT2Q9H1B5 865 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 C1orf112Q9NSG2 853 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SEPT11Q9NVA2 429 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 SNTG2Q9NY99 539 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 CHORDC1Q9UHD1 332 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 PUF60Q9UHX1 559 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 COG5Q9UP83 839 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 GINS2Q9Y248 185 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 DAAM1Q9Y4D1 1078 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 HES2Q9Y543 173 aa6.12□□□□□ -1.43
SF3B3-210ENST00000567654 BZW2Q9Y6E2 419 aaKnown RBP6.12□□□□□ -1.43
SF3B3-210ENST00000567654 GREB1Q4ZG55 1949 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MROH7Q68CQ1 1323 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 C17orf102A2RUQ5 167 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 BTNL10A8MVZ5 291 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 DYNC1I1O14576 645 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 TACC1O75410 805 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 LRIG2O94898 1065 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ERLIN2O94905 339 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MED26O95402 600 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 EOMESO95936 686 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ITGB3P05106 788 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 H2AFZP0C0S5 128 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 TMEM253P0C7T8 217 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 KRT5P13647 590 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 DARSP14868 501 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ZSCAN20P17040 1043 aaPredicted RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ANXA13P27216 316 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 POLR2BP30876 1174 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 CXCR5P32302 372 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ZNF132P52740 706 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 CDR2Q01850 454 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MGAT3Q09327 533 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MAP3K21Q5TCX8 1036 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MFSD14CQ5VZR4 134 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 H2AFVQ71UI9 128 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 USP37Q86T82 979 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 FAM228AQ86W67 206 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 LRRC57Q8N9N7 239 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 NOA1Q8NC60 698 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 RBBP8NLQ8NC74 664 aaPredicted RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 TRIM58Q8NG06 486 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MS4A14Q96JA4 679 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 HEXIM2Q96MH2 286 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 TWNKQ96RR1 684 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 MMS19Q96T76 1030 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ISCUQ9H1K1 167 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 NXF3Q9H4D5 531 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 SMYD3Q9H7B4 428 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 RPF1Q9H9Y2 349 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 TUBGCP4Q9UGJ1 667 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 HMGXB4Q9UGU5 601 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 SRRDQ9UH36 339 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 GTF2IRD1Q9UHL9 959 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 ADAM30Q9UKF2 790 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 SNX12Q9UMY4 172 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 CNTN6Q9UQ52 1028 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 STXBP5LQ9Y2K9 1186 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 NOC2LQ9Y3T9 749 aaKnown RBP6.11□□□□□ -1.43
SF3B3-210ENST00000567654 HYOU1Q9Y4L1 999 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 NME7Q9Y5B8 376 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 PCDHB4Q9Y5E5 795 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 TTC3P53804 2025 aa6.11□□□□□ -1.43
SF3B3-210ENST00000567654 A0A0A6YYK5 440 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ANO9A1A5B4 782 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 FAM86C2PA6NEL3 165 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SLC22A31A6NKX4 558 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 BUB1BO60566 1050 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 IL18RAPO95256 599 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CHRNA1P02708 482 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 FTLP02792 175 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ASGR1P07306 291 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 WEE2P0C1S8 567 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 TMEM191BP0C7N4 346 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 RARBP10826 455 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 UNGP13051 313 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CD58P19256 250 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 AKAP5P24588 427 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 IGFBP6P24592 240 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-210ENST00000567654 PDE6CP51160 858 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 DNA2P51530 1060 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CDH8P55286 799 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 C2orf54Q08AI8 447 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SURF1Q15526 300 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 KCNA10Q16322 511 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 CLEC16AQ2KHT3 1053 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 ZNF699Q32M78 642 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 C2CD6Q53TS8 623 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 GLRA4Q5JXX5 417 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 TMEM201Q5SNT2 666 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 TEX35Q5T0J7 233 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 C10orf76Q5T2E6 689 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 SLC6A19Q695T7 634 aa6.1□□□□□ -1.43
SF3B3-210ENST00000567654 OVOS1Q6IE37 1185 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms