RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 IL37Q9NZH6 218 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 KIAA1257Q9ULG3 409 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 ZKSCAN5Q9Y2L8 839 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 CACNA1HO95180 2353 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 FAM92AA1XBS5 289 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 C2orf78A6NCI8 922 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 ARNTLO00327 626 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 PI15O43692 258 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 PON1P27169 355 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 KRT9P35527 623 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 RAD23BP54727 409 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 AMPD2Q01433 879 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 KCNMA1Q12791 1236 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 PDGFRLQ15198 375 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 PPP1R26Q5T8A7 1209 aaPredicted RBP14.16□□□□□ -0.14
CLK3-218ENST00000566926 IER5LQ5T953 404 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 SNX30Q5VWJ9 437 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 ARHGAP17Q68EM7 881 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 TRIM65Q6PJ69 517 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 CLEC20AQ6ZU45 233 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 DDX42Q86XP3 938 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLK3-218ENST00000566926 CCDC105Q8IYK2 499 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 PPM1KQ8N3J5 372 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 KIAA1958Q8N8K9 716 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 SLC4A11Q8NBS3 891 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 ZMIZ2Q8NF64 920 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 FAM122AQ96E09 287 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 CYP2S1Q96SQ9 504 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 ARID3AQ99856 593 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 BAG1Q99933 345 aaPredicted RBP14.16□□□□□ -0.14
CLK3-218ENST00000566926 LSM14BQ9BX40 385 aaKnown RBP14.16□□□□□ -0.14
CLK3-218ENST00000566926 UBXN6Q9BZV1 441 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 SMG9Q9H0W8 520 aaKnown RBP14.16□□□□□ -0.14
CLK3-218ENST00000566926 TLR8Q9NR97 1041 aaKnown RBP14.16□□□□□ -0.14
CLK3-218ENST00000566926 GKN1Q9NS71 199 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 FAM207AQ9NSI2 230 aaPredicted RBP14.16□□□□□ -0.14
CLK3-218ENST00000566926 ABHD10Q9NUJ1 306 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 ARHGAP26Q9UNA1 814 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 PIAS3Q9Y6X2 628 aa14.16□□□□□ -0.14
CLK3-218ENST00000566926 FAM170BA6NMN3 283 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 ARHGAP6O43182 974 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 BEST1O76090 585 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 PAEPP09466 180 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 VDRP11473 427 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 FECHP22830 423 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 HNRNPH3P31942 346 aaKnown RBP14.15□□□□□ -0.14
CLK3-218ENST00000566926 TUBP50607 506 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 SLC7A9P82251 487 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 CDK17Q00537 523 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 GCNT1Q02742 428 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 MTF1Q14872 753 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 ITPRIPL2Q3MIP1 535 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 SGO2Q562F6 1265 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 HECTD3Q5T447 861 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 RALGPS2Q86X27 583 aaPredicted RBP14.15□□□□□ -0.14
CLK3-218ENST00000566926 TMTC1Q8IUR5 882 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 DTWD2Q8NBA8 298 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 SCAMP5Q8TAC9 235 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 LMO3Q8TAP4 145 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 FAM3CQ92520 227 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 EXOC4Q96A65 974 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 JAKMIP2Q96AA8 810 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 LRRC3BQ96PB8 259 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 FOXQ1Q9C009 403 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 HESX1Q9UBX0 185 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 APEX2Q9UBZ4 518 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
CLK3-218ENST00000566926 CCL26Q9Y258 94 aa14.15□□□□□ -0.14
CLK3-218ENST00000566926 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLK3-218ENST00000566926 MYOFQ9NZM1 2061 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 CCP110O43303 1012 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 OLFM2O95897 454 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 OAS1P00973 400 aaKnown RBP14.14□□□□□ -0.15
CLK3-218ENST00000566926 DCNP07585 359 aaKnown RBP14.14□□□□□ -0.15
CLK3-218ENST00000566926 CCDC172P0C7W6 258 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 SKILP12757 684 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 UCHL3P15374 230 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 CD19P15391 556 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 ACO1P21399 889 aaKnown RBP14.14□□□□□ -0.15
CLK3-218ENST00000566926 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
CLK3-218ENST00000566926 IFNAR2P48551 515 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 PSEN1P49768 467 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 USP4Q13107 963 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 RUNX3Q13761 415 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 STILQ15468 1287 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 ZNF77Q15935 545 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 KLHDC7AQ5VTJ3 777 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 TMEM270Q6UE05 265 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 ENOSF1Q7L5Y1 443 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 ANKRD52Q8NB46 1076 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 PRSS33Q8NF86 280 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 SH3RF2Q8TEC5 729 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 CPLX3Q8WVH0 158 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 ZFYVE19Q96K21 471 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 SLC22A12Q96S37 553 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 FAM83CQ9BQN1 747 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 INTS2Q9H0H0 1204 aaKnown RBP14.14□□□□□ -0.15
CLK3-218ENST00000566926 SCML2Q9UQR0 700 aa14.14□□□□□ -0.15
CLK3-218ENST00000566926 PCDHB4Q9Y5E5 795 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms