RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 E2F8A0AVK6 867 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 RNF225M0QZC1 329 aaPredicted RBP20.34■□□□□ 0.85
CCDC113-204ENST00000566498 TRDMT1O14717 391 aaKnown RBP20.34■□□□□ 0.85
CCDC113-204ENST00000566498 IRF1P10914 325 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 RARGP13631 454 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 HOXD11P31277 338 aaPredicted RBP20.34■□□□□ 0.85
CCDC113-204ENST00000566498 PSEN1P49768 467 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 BCAT1P54687 386 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 GCNT1Q02742 428 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 PDE4CQ08493 712 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 PPP2R5DQ14738 602 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 C10orf120Q5SQS8 335 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 TSSK4Q6SA08 328 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 TTC30AQ86WT1 665 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 CHFRQ96EP1 664 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 P2RY13Q9BPV8 354 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 NMUR1Q9HB89 426 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 LRRC4Q9HBW1 653 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 OSER1Q9NX31 292 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 TBC1D14Q9P2M4 693 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 NUDT5Q9UKK9 219 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 R4GN57 208 aa20.34■□□□□ 0.85
CCDC113-204ENST00000566498 RALAP11233 206 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 KRT5P13647 590 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 CXCL12P48061 93 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 TKTL1P51854 596 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 GOLGA8FQ08AF8 430 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 GOLGA8DPQ0D2H9 430 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 HSP90AA4PQ58FG1 418 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 TMEM196Q5HYL7 178 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 ZC3H14Q6PJT7 736 aaKnown RBP20.33■□□□□ 0.85
CCDC113-204ENST00000566498 GBP6Q6ZN66 633 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 CCDC186Q7Z3E2 898 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 TADA2BQ86TJ2 420 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 SYNPOQ8N3V7 929 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 KIAA1958Q8N8K9 716 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 RBBP8NLQ8NC74 664 aaPredicted RBP20.33■□□□□ 0.85
CCDC113-204ENST00000566498 TFAP2BQ92481 460 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 NKD2Q969F2 451 aaPredicted RBP20.33■□□□□ 0.85
CCDC113-204ENST00000566498 IER2Q9BTL4 223 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 FBRSL1Q9HCM7 1045 aaKnown RBP20.33■□□□□ 0.85
CCDC113-204ENST00000566498 CYLDQ9NQC7 956 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 DNMT3LQ9UJW3 386 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 USP3Q9Y6I4 520 aa20.33■□□□□ 0.85
CCDC113-204ENST00000566498 TULP2O00295 520 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 O00370 1275 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 XPO1O14980 1071 aaKnown RBP20.32■□□□□ 0.84
CCDC113-204ENST00000566498 SLC9A1P19634 815 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 CCR3P51677 355 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 BST2Q10589 180 aaKnown RBP20.32■□□□□ 0.84
CCDC113-204ENST00000566498 CCINQ13939 588 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 CNGA2Q16280 664 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 EXOC3L4Q17RC7 722 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 ZNF528Q3MIS6 628 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 FSTL4Q6MZW2 842 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 MAMSTRQ6ZN01 415 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 SCD5Q86SK9 330 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 ARHGAP18Q8N392 663 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 SPEM1Q8N4L4 309 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 ATRIPQ8WXE1 791 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 CD101Q93033 1021 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 ZFRQ96KR1 1074 aaKnown RBP20.32■□□□□ 0.84
CCDC113-204ENST00000566498 KREMEN1Q96MU8 473 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCDC113-204ENST00000566498 MYO16Q9Y6X6 1858 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 PATJQ8NI35 1801 aa20.32■□□□□ 0.84
CCDC113-204ENST00000566498 PROB1E7EW31 1015 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 PES1O00541 588 aaKnown RBP20.31■□□□□ 0.84
CCDC113-204ENST00000566498 ZBED1O96006 694 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 EGFP01133 1207 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 CALCAP01258 141 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 PRKCSHP14314 528 aaPredicted RBP20.31■□□□□ 0.84
CCDC113-204ENST00000566498 DRD1P21728 446 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 BRD2P25440 801 aaKnown RBP20.31■□□□□ 0.84
CCDC113-204ENST00000566498 PLA2G4AP47712 749 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 MFAP3P55082 362 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 GAS6Q14393 721 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 DHCR24Q15392 516 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 STILQ15468 1287 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 CT47A1Q5JQC4 288 aaPredicted RBP20.31■□□□□ 0.84
CCDC113-204ENST00000566498 RAB41Q5JT25 222 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 NAIF1Q69YI7 327 aaPredicted RBP20.31■□□□□ 0.84
CCDC113-204ENST00000566498 SASS6Q6UVJ0 657 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 LCLAT1Q6UWP7 414 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 Q6ZS52 159 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 ENOSF1Q7L5Y1 443 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 KLF16Q9BXK1 252 aaPredicted RBP20.31■□□□□ 0.84
CCDC113-204ENST00000566498 CACNA1HO95180 2353 aa20.31■□□□□ 0.84
CCDC113-204ENST00000566498 MDM4O15151 490 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 GFRA3O60609 400 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 SETSIPP0DME0 302 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 LCP1P13796 627 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 USP8P40818 1118 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 SATB1Q01826 763 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 MAN2A1Q16706 1144 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 ARHGAP44Q17R89 818 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 GJB7Q6PEY0 223 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 KLHDC10Q6PID8 442 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 TRIM65Q6PJ69 517 aa20.3■□□□□ 0.84
CCDC113-204ENST00000566498 RHBDF2Q6PJF5 856 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms