RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SMC4Q9NTJ3 1288 aa5.74□□□□□ -1.49
CNOT1-209ENST00000566240 CNTN6Q9UQ52 1028 aa5.74□□□□□ -1.49
CNOT1-209ENST00000566240 SNX14Q9Y5W7 946 aa5.74□□□□□ -1.49
CNOT1-209ENST00000566240 SCINQ9Y6U3 715 aa5.74□□□□□ -1.49
CNOT1-209ENST00000566240 COL15A1P39059 1388 aa5.74□□□□□ -1.49
CNOT1-209ENST00000566240 FER1L4A9Z1Z3 1794 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 GRXCR1A8MXD5 290 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 AHRRA9YTQ3 701 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 E7EVH7 732 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 TRIM24O15164 1050 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 RPP40O75818 363 aaKnown RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 ZSCAN22P10073 491 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 ACO1P21399 889 aaKnown RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 GATA3P23771 443 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 YY1P25490 414 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 KRT9P35527 623 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 ZEB1P37275 1124 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 RXRGP48443 463 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 ADAM17P78536 824 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 MAPK7Q13164 816 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 GEN1Q17RS7 908 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 FAM180BQ6P0A1 224 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 C1orf122Q6ZSJ8 110 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 ANKS1BQ7Z6G8 1248 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 LRRC56Q8IYG6 542 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 FSTL5Q8N475 847 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 OSCP1Q8WVF1 389 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 CPT1BQ92523 772 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 NACC2Q96BF6 587 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 FAM136AQ96C01 138 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 BOD1Q96IK1 185 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 CHODLQ9H9P2 273 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 UNKLQ9H9P5 680 aaKnown RBP5.73□□□□□ -1.49
CNOT1-209ENST00000566240 G6PC2Q9NQR9 355 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 TMEM160Q9NX00 188 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 SLC27A6Q9Y2P4 619 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 ITIH6Q6UXX5 1313 aa5.73□□□□□ -1.49
CNOT1-209ENST00000566240 PATE3B3GLJ2 98 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 CBFA2T3O75081 653 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 CER1O95813 267 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 HTR7P34969 479 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 LIFRP42702 1097 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 CCR5P51681 352 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 EIF5P55010 431 aaKnown RBP5.72□□□□□ -1.49
CNOT1-209ENST00000566240 TIRAPP58753 221 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 VAMP2P63027 116 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 SP2Q02086 613 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 CHRNDQ07001 517 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 CRHR2Q13324 411 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 RRP1BQ14684 758 aaKnown RBP5.72□□□□□ -1.49
CNOT1-209ENST00000566240 LY6KQ17RY6 165 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 SPDYE7PQ495Y7 208 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 SP5Q6BEB4 398 aaPredicted RBP5.72□□□□□ -1.49
CNOT1-209ENST00000566240 IZUMO1Q8IYV9 350 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 C11orf44Q8N8P7 122 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 PCYOX1LQ8NBM8 494 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 CEP70Q8NHQ1 597 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 Q8TCH9 128 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 ATG4AQ8WYN0 398 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 HDAC2Q92769 488 aaKnown RBP5.72□□□□□ -1.49
CNOT1-209ENST00000566240 HVCN1Q96D96 273 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 RNF31Q96EP0 1072 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 TWNKQ96RR1 684 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 HAPLN3Q96S86 360 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 VN1R3Q9BXE9 311 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 NOD2Q9HC29 1040 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 RASSF1Q9NS23 344 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 NDUFAF4Q9P032 175 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 RIMKLBQ9ULI2 386 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 NFU1Q9UMS0 254 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 MAP3K2Q9Y2U5 619 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 NOX1Q9Y5S8 564 aa5.72□□□□□ -1.49
CNOT1-209ENST00000566240 ZAR1LA6NP61 321 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 KIF28PB7ZC32 967 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 PPM1DO15297 605 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 ZNF623O75123 536 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 IFIT1P09914 478 aaKnown RBP5.71□□□□□ -1.5
CNOT1-209ENST00000566240 ATP1A3P13637 1013 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 BMP7P18075 431 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 SERPINA4P29622 427 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 MTHFSP49914 203 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 CDK7P50613 346 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 CLCA4Q14CN2 919 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 ACOX1Q15067 660 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 SMAD1Q15797 465 aaKnown RBP5.71□□□□□ -1.5
CNOT1-209ENST00000566240 P3H1Q32P28 736 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 UBXN11Q5T124 520 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 MAP3K21Q5TCX8 1036 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 SLC9A4Q6AI14 798 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 MSANTD2Q6P1R3 559 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 RINLQ6ZS11 566 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 TRABD2AQ86V40 505 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 HMGB4Q8WW32 186 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 SSBP3Q9BWW4 388 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-209ENST00000566240 ACTRT3Q9BYD9 372 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 ALOXE3Q9BYJ1 711 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 TPSD1Q9BZJ3 242 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 JMJD4Q9H9V9 463 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 GALNT9Q9HCQ5 603 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms