RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 DENND1BQ6P3S1 775 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 TRIM67Q6ZTA4 783 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 SCD5Q86SK9 330 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 ZNF677Q86XU0 584 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 DNASE1L2Q92874 299 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 CDK5RAP1Q96SZ6 601 aaKnown RBP22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 ULBP1Q9BZM6 244 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 RNF38Q9H0F5 515 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 SMG9Q9H0W8 520 aaKnown RBP22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 EPHX3Q9H6B9 360 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 WNT16Q9UBV4 365 aa22.15■■□□□ 1.14
SHCBP1-205ENST00000566016 A0A1W2PQH9 124 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 CHADO15335 359 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 FBXO21O94952 628 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 PBX1P40424 430 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 PGFP49763 221 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 GPC5P78333 572 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 PLCB2Q00722 1185 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 ZNF77Q15935 545 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 ARHGAP29Q52LW3 1261 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 FIGNQ5HY92 759 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 BHLHA9Q7RTU4 235 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 TADA2BQ86TJ2 420 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 IRGQQ8WZA9 623 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 DDX1Q92499 740 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 IRF7Q92985 503 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 ASIC4Q96FT7 647 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 LRRC3BQ96PB8 259 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 SLC4A5Q9BY07 1137 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 CCSER2Q9H7U1 834 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 NMUR1Q9HB89 426 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 OSER1Q9NX31 292 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 CEP83Q9Y592 693 aa22.14■■□□□ 1.13
SHCBP1-205ENST00000566016 ARNTLO00327 626 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 GABBR2O75899 941 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 TPM3P06753 285 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 CFHP08603 1231 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 PDCLQ13371 301 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 GRM2Q14416 872 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 CACNA2D4Q7Z3S7 1137 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 DDX42Q86XP3 938 aaKnown RBP eCLIP22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 C1QTNF1Q9BXJ1 281 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 EDEM3Q9BZQ6 932 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 BRD9Q9H8M2 597 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 THG1LQ9NWX6 298 aaKnown RBP22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 NAGPAQ9UK23 515 aa22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 NOCTQ9UK39 431 aaKnown RBP22.13■■□□□ 1.13
SHCBP1-205ENST00000566016 SART1O43290 800 aaKnown RBP22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 GFPT2O94808 682 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 LSM8O95777 96 aaKnown RBP22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 RALAP11233 206 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 GDI1P31150 447 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 CDH5P33151 784 aaPredicted RBP22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 RGS7P49802 495 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 DAOAP59103 153 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 TMEM110Q86TL2 294 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 NOP9Q86U38 636 aaKnown RBP22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 YAF2Q8IY57 180 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 SH3RF2Q8TEC5 729 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 IQCDQ96DY2 449 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 NOX5Q96PH1 765 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 TTYH3Q9C0H2 523 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 CYTH4Q9UIA0 394 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 CPQQ9Y646 472 aa22.12■■□□□ 1.13
SHCBP1-205ENST00000566016 ZNF263O14978 683 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 RARGP13631 454 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 ATP5C1P36542 298 aaKnown RBP22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 YWHAGP61981 247 aaKnown RBP eCLIP22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 MTF1Q14872 753 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 RNF214Q8ND24 703 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 RIN3Q8TB24 985 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 BAP1Q92560 729 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 ZFRQ96KR1 1074 aaKnown RBP22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 IFNKQ9P0W0 207 aa22.11■■□□□ 1.13
SHCBP1-205ENST00000566016 GPR37L1O60883 481 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 CCDC172P0C7W6 258 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 MBL2P11226 248 aaPredicted RBP22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 LCP1P13796 627 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 ZXDBP98169 803 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 GPIHBP1Q8IV16 184 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 WDTC1Q8N5D0 677 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 TMEM35BQ8NCS4 154 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 NUP58Q9BVL2 599 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 NACA2Q9H009 215 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 ST7Q9NRC1 585 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 FBXL21Q9UKT6 434 aa22.1■■□□□ 1.13
SHCBP1-205ENST00000566016 TMEM221A6NGB7 291 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 YJEFN3A6XGL0 299 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 E7ENQ6 273 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 M0R296 226 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 LEFTY2O00292 366 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 MLLT6P55198 1093 aaPredicted RBP22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 SNX16P57768 344 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 CDR2Q01850 454 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 BMP8AQ7Z5Y6 402 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 PASD1Q8IV76 773 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 FAM83CQ9BQN1 747 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 C11orf16Q9NQ32 467 aa22.09■■□□□ 1.13
SHCBP1-205ENST00000566016 ARHGEF3Q9NR81 526 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms