RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 EXOC4Q96A65 974 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 RTKNQ9BST9 563 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 INVSQ9Y283 1065 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 NUP205Q92621 2012 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 SLC30A4O14863 429 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 TBX18O95935 607 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 IRF1P10914 325 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 ADH5P11766 374 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 PNOCQ13519 176 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 EMC10Q5UCC4 262 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 NETO1Q8TDF5 533 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 TPSD1Q9BZJ3 242 aa25.12■■□□□ 1.61
RAB40C-209ENST00000565511 SCAND2PQ9GZW5 306 aaPredicted RBP25.12■■□□□ 1.61
RAB40C-209ENST00000565511 DUSP15Q9H1R2 295 aaPredicted RBP25.12■■□□□ 1.61
RAB40C-209ENST00000565511 THADAQ6YHU6 1953 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 E2F8A0AVK6 867 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 SLC9A3R1O14745 358 aaPredicted RBP25.11■■□□□ 1.61
RAB40C-209ENST00000565511 CYP26A1O43174 497 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 GREM1O60565 184 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 CD58P19256 250 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 TUBP50607 506 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 TMEM92Q6UXU6 159 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 INTS8Q75QN2 995 aaKnown RBP25.11■■□□□ 1.61
RAB40C-209ENST00000565511 DDX42Q86XP3 938 aaKnown RBP eCLIP25.11■■□□□ 1.61
RAB40C-209ENST00000565511 ZC3H10Q96K80 434 aaKnown RBP25.11■■□□□ 1.61
RAB40C-209ENST00000565511 HNRNPABQ99729 332 aaKnown RBP25.11■■□□□ 1.61
RAB40C-209ENST00000565511 NIF3L1Q9GZT8 377 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 NMUR1Q9HB89 426 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 EBF1Q9UH73 591 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 MMP17Q9ULZ9 603 aa25.11■■□□□ 1.61
RAB40C-209ENST00000565511 TRIM24O15164 1050 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 TLR5O60602 858 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 CILPO75339 1184 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 KAT7O95251 611 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 FAM200BP0CF97 657 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 SDHBP21912 280 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 MCCD1P59942 119 aaPredicted RBP25.1■■□□□ 1.61
RAB40C-209ENST00000565511 ADAM9Q13443 819 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 PLA2G2CQ5R387 149 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 ETFBKMTQ8IXQ9 262 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 ALLCQ8N6M5 410 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 TSTD1Q8NFU3 115 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 CCDC47Q96A33 483 aaKnown RBP25.1■■□□□ 1.61
RAB40C-209ENST00000565511 LOXL4Q96JB6 756 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 PNKPQ96T60 521 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 COMMD8Q9NX08 183 aa25.1■■□□□ 1.61
RAB40C-209ENST00000565511 TPRP12270 2363 aaKnown RBP25.1■■□□□ 1.61
RAB40C-209ENST00000565511 SGK1O00141 431 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 MDM4O15151 490 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 ADH1CP00326 375 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 PSMC2P35998 433 aaKnown RBP25.09■■□□□ 1.61
RAB40C-209ENST00000565511 KIR2DL1P43626 348 aaPredicted RBP25.09■■□□□ 1.61
RAB40C-209ENST00000565511 DGKEP52429 567 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 TCEAL6Q6IPX3 200 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 ANO7Q6IWH7 933 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 RASSF3Q86WH2 238 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 NAT16Q8N8M0 369 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 IL17RCQ8NAC3 791 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 ERCC4Q92889 916 aaPredicted RBP25.09■■□□□ 1.61
RAB40C-209ENST00000565511 TCEAL3Q969E4 200 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 CYFIP2Q96F07 1278 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 TMEM8AQ9HCN3 771 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 HCN2Q9UL51 889 aa25.09■■□□□ 1.61
RAB40C-209ENST00000565511 KIF20AO95235 890 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 KLF8O95600 359 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-209ENST00000565511 KRT13P13646 458 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 BCKDHBP21953 392 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 TIE1P35590 1138 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 TMEM25Q86YD3 366 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 FMR1NBQ8N0W7 255 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-209ENST00000565511 MDGA1Q8NFP4 955 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 P2RY11Q96G91 374 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 ARID3AQ99856 593 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 NT5C1AQ9BXI3 368 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 KLF16Q9BXK1 252 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-209ENST00000565511 CYP3A43Q9HB55 503 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 ARHGEF4Q9NR80 690 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 TBC1D14Q9P2M4 693 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 NUDT5Q9UKK9 219 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 SCML2Q9UQR0 700 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 SH3BP1Q9Y3L3 701 aa25.08■■□□□ 1.61
RAB40C-209ENST00000565511 TNRC6BQ9UPQ9 1833 aaKnown RBP25.07■■□□□ 1.6
RAB40C-209ENST00000565511 HOXC11O43248 304 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-209ENST00000565511 ADAM23O75077 832 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 APODP05090 189 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 ZNF806P0C7X5 589 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 MPLP40238 635 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 EIF2DP41214 584 aaKnown RBP25.07■■□□□ 1.6
RAB40C-209ENST00000565511 CRY1Q16526 586 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 ZNF394Q53GI3 561 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 PPP1R26Q5T8A7 1209 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-209ENST00000565511 TXNDC5Q8NBS9 432 aaKnown RBP25.07■■□□□ 1.6
RAB40C-209ENST00000565511 ATP6V1DQ9Y5K8 247 aa25.07■■□□□ 1.6
RAB40C-209ENST00000565511 PLXND1Q9Y4D7 1925 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 A0A0A0MRY4 1105 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 A0A1W2PQH9 124 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 TULP3O75386 442 aa25.06■■□□□ 1.6
RAB40C-209ENST00000565511 ACO1P21399 889 aaKnown RBP25.06■■□□□ 1.6
RAB40C-209ENST00000565511 PMS1P54277 932 aaKnown RBP25.06■■□□□ 1.6
RAB40C-209ENST00000565511 MRPS21P82921 87 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms