RNA–Protein interactions for RNA: ENST00000565351.5

KIFC3-220, Transcript of kinesin family member C3, humanhuman

TSL 1 (best)

Gene KIFC3, Length 297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-220ENST00000565351 DYNC1I1O14576 645 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 MDM4O15151 490 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 C1RP00736 705 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 FGGP02679 453 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 LTFP02788 710 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 UQCRHP07919 91 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 HAPLN1P10915 354 aaPredicted RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 TCF4P15884 667 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 IL1R2P27930 398 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 GRIK1P39086 918 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 ARSEP51690 589 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 HDAC4P56524 1084 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 ROR1Q01973 937 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 KRT17Q04695 432 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 KLF1Q13351 362 aaPredicted RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 RAB33AQ14088 237 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 PTPROQ16827 1216 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 SEL1L2Q5TEA6 688 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 RNF19BQ6ZMZ0 732 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 SLC13A5Q86YT5 568 aaPredicted RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 NUP93Q8N1F7 819 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 ZNF461Q8TAF7 563 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 RIN2Q8WYP3 895 aaPredicted RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 RUBCNQ92622 972 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 FBXO44Q9H4M3 255 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
KIFC3-220ENST00000565351 SCML2Q9UQR0 700 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 RWDD3Q9Y3V2 267 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 CDY1Q9Y6F8 540 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 CHD7Q9P2D1 2997 aa12.79□□□□□ -0.36
KIFC3-220ENST00000565351 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 WDR27A2RRH5 827 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 TARSL2A2RTX5 802 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 C5orf67F2Z3F1 127 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 GRAP2O75791 330 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 FGF18O76093 207 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 RTN3O95197 1032 aaPredicted RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 USP17L7P0C7H9 530 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 CPB1P15086 417 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ATF2P15336 505 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ATP2A2P16615 1042 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 CETN2P41208 172 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 DNA2P51530 1060 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 SLC5A3P53794 718 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 AIF1P55008 147 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ERCC6LQ2NKX8 1250 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 SH3PXD2AQ5TCZ1 1133 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 KIAA1841Q6NSI8 718 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 MON1AQ86VX9 555 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 C12orf50Q8NA57 414 aaPredicted RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 NOA1Q8NC60 698 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ZBP1Q9H171 429 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 SLITRK6Q9H5Y7 841 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 HOMER3Q9NSC5 361 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ABCC13Q9NSE7 274 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 RBM12Q9NTZ6 932 aaKnown RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
KIFC3-220ENST00000565351 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 USTQ9Y2C2 406 aa12.78□□□□□ -0.36
KIFC3-220ENST00000565351 BHMG1C9JSJ3 638 aaPredicted RBP12.77□□□□□ -0.37
KIFC3-220ENST00000565351 KRIT1O00522 736 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 ADAM12O43184 909 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 PRPSAP2O60256 369 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 F9P00740 461 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 IGLV3-25P01717 112 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 URODP06132 367 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 RARAP10276 462 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 CTSAP10619 480 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 KDELR1P24390 212 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 OR1D2P34982 312 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 BMPR1AP36894 532 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 CDKN2BP42772 138 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 PSEN1P49768 467 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
KIFC3-220ENST00000565351 PDK2Q15119 407 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 LONRF2Q1L5Z9 754 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 C15orf59Q2T9L4 293 aaPredicted RBP12.77□□□□□ -0.37
KIFC3-220ENST00000565351 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
KIFC3-220ENST00000565351 TFDP3Q5H9I0 405 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms