RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 BBS7Q8IWZ6 715 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 FAM160A2Q8N612 972 aaPredicted RBP10.6□□□□□ -0.71
CMTM3-209ENST00000565003 CCDC150Q8NCX0 1101 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 GAB3Q8WWW8 586 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 SMARCE1Q969G3 411 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 FBXO44Q9H4M3 255 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 RAB20Q9NX57 234 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 USP18Q9UMW8 372 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 MYOFQ9NZM1 2061 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 FRYLO94915 3013 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 DMXL1Q9Y485 3027 aa10.6□□□□□ -0.71
CMTM3-209ENST00000565003 CACNA1AO00555 2505 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 EML5Q05BV3 1969 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 CCDC163A0A0D9SF12 145 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 STX10O60499 249 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 GREM1O60565 184 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 SMC2O95347 1197 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TBX18O95935 607 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 ADH1CP00326 375 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 RETP07949 1114 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 IRF1P10914 325 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 ADH5P11766 374 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TRIM21P19474 475 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 ACO1P21399 889 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 SLC6A11P48066 632 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 RAD23BP54727 409 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 FKBP3Q00688 224 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 DMC1Q14565 340 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 RSPO4Q2I0M5 234 aaPredicted RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 LY6G5CQ5SRR4 150 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TCERG1LQ5VWI1 586 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 ERMP1Q7Z2K6 904 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 CAMKK1Q8N5S9 505 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 USP33Q8TEY7 942 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TATDN2Q93075 761 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 ACDQ96AP0 544 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 HEXIM2Q96MH2 286 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TIGD1Q96MW7 591 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TSG101Q99816 390 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 NACA2Q9H009 215 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 NMUR1Q9HB89 426 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 PNPLA8Q9NP80 782 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 CYLDQ9NQC7 956 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TLR8Q9NR97 1041 aaKnown RBP10.59□□□□□ -0.71
CMTM3-209ENST00000565003 CISHQ9NSE2 258 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 DLL3Q9NYJ7 618 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 TBC1D14Q9P2M4 693 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 MAN1B1Q9UKM7 699 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 SCML2Q9UQR0 700 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 SH3BP1Q9Y3L3 701 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 SDK1Q7Z5N4 2213 aa10.59□□□□□ -0.71
CMTM3-209ENST00000565003 A0A1W2PQH9 124 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 MDM4O15151 490 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 AXIN1O15169 862 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 RPP40O75818 363 aaKnown RBP10.58□□□□□ -0.72
CMTM3-209ENST00000565003 BMP6P22004 513 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 EIF2DP41214 584 aaKnown RBP10.58□□□□□ -0.72
CMTM3-209ENST00000565003 KIF11P52732 1056 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 LMNB2Q03252 620 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 LRRC63Q05C16 580 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 KDSRQ06136 332 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 PUM1Q14671 1186 aaKnown RBP eCLIP10.58□□□□□ -0.72
CMTM3-209ENST00000565003 C2orf27AQ580R0 203 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 ISM2Q6H9L7 571 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 SCD5Q86SK9 330 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 KBTBD6Q86V97 674 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 ETFBKMTQ8IXQ9 262 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 PHTF2Q8N3S3 785 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 CCDC33Q8N5R6 958 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 SLC4A11Q8NBS3 891 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 SLC35C1Q96A29 364 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 OTUB2Q96DC9 234 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 TMEM176AQ96HP8 235 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 FAXDC2Q96IV6 333 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 DUSP9Q99956 384 aaKnown RBP10.58□□□□□ -0.72
CMTM3-209ENST00000565003 KLF16Q9BXK1 252 aaPredicted RBP10.58□□□□□ -0.72
CMTM3-209ENST00000565003 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 SEMA4GQ9NTN9 838 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 NUDT5Q9UKK9 219 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 COQ4Q9Y3A0 265 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.58□□□□□ -0.72
CMTM3-209ENST00000565003 SPAG17Q6Q759 2223 aa10.58□□□□□ -0.72
CMTM3-209ENST00000565003 PSMA7O14818 248 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 HOXC11O43248 304 aaPredicted RBP10.57□□□□□ -0.72
CMTM3-209ENST00000565003 LRP3O75074 770 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 GADD45BO75293 160 aaPredicted RBP10.57□□□□□ -0.72
CMTM3-209ENST00000565003 KAT7O95251 611 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 APBB3O95704 486 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 CCDC192P0DO97 292 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 ATP5C1P36542 298 aaKnown RBP10.57□□□□□ -0.72
CMTM3-209ENST00000565003 FOXK2Q01167 660 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 GAD2Q05329 585 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 CUL2Q13617 745 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 ARHGAP17Q68EM7 881 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 KLHDC10Q6PID8 442 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 HTR3DQ70Z44 454 aa10.57□□□□□ -0.72
CMTM3-209ENST00000565003 DGLUCYQ7Z3D6 616 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms