RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-213	ENST00000564757	CYP26C1	Q6V0L0	522 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	KIAA0408	Q6ZU52	694 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	BHLHA9	Q7RTU4	235 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	FTSJ3	Q8IY81	847 aa	Known RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	COLGALT2	Q8IYK4	626 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	NRSN1	Q8IZ57	195 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	FSTL5	Q8N475	847 aa	Predicted RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	ABHD5	Q8WTS1	349 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	AFG1L	Q8WV93	481 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	GOLGA1	Q92805	767 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	USP13	Q92995	863 aa	Predicted RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	C3orf49	Q96BT1	292 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	MPP4	Q96JB8	637 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZNF668	Q96K58	619 aa	Predicted RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	HIST1H2AA	Q96QV6	131 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	NEU1	Q99519	415 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	EIF3C	Q99613	913 aa	Known RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	GDF15	Q99988	308 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	PYM1	Q9BRP8	204 aa	Known RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	RTKN	Q9BST9	563 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	TPSD1	Q9BZJ3	242 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	INO80B	Q9C086	356 aa	Predicted RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	CXorf36	Q9H7Y0	433 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	SYNPO2L	Q9H987	977 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	DNMT3B	Q9UBC3	853 aa	Known RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	DNAJB11	Q9UBS4	358 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	NDRG4	Q9ULP0	352 aa	Known RBP	4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	CA14	Q9ULX7	337 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	CAPN11	Q9UMQ6	739 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	FPGT-TNNI3K	V9GXZ4	949 aa		4.14	□□□□□ -1.75
SCAPER-213	ENST00000564757	TRGV11	A0A075B6L2	103 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	PNMA6E	A0A0J9YXQ4	647 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757		E7ENX8	843 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757		J3KTA2	159 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	KIAA0355	O15063	1070 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	CD3EAP	O15446	510 aa	Known RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	KCNQ3	O43525	872 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	DNPH1	O43598	174 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	KCNA3	P22001	575 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	MST1	P26927	711 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	PPIF	P30405	207 aa	Known RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	AARS	P49588	968 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	TOB1	P50616	345 aa	Predicted RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	PDE6C	P51160	858 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	CXADR	P78310	365 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	TAP2	Q03519	686 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	SCAP	Q12770	1279 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	TBX2	Q13207	712 aa	Predicted RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	DYRK1A	Q13627	763 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	CCNI	Q14094	377 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	MANEAL	Q5VSG8	457 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	ICE2	Q659A1	982 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	LIN54	Q6MZP7	749 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	LVRN	Q6Q4G3	990 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	OLFML1	Q6UWY5	402 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	CLEC9A	Q6UXN8	241 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	HTR3D	Q70Z44	454 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	MAATS1	Q7Z4T9	603 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	MOGAT3	Q86VF5	341 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	SUGP1	Q8IWZ8	645 aa	Known RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	BEND2	Q8NDZ0	799 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZNF384	Q8TF68	577 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	WDR60	Q8WVS4	1066 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	EID2B	Q96D98	161 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	LRIG1	Q96JA1	1093 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZBTB45	Q96K62	511 aa	Predicted RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	TRAPPC9	Q96Q05	1148 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	NELL2	Q99435	816 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	ALOXE3	Q9BYJ1	711 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	TMX4	Q9H1E5	349 aa	Predicted RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	TOR3A	Q9H497	397 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	ELAC1	Q9H777	363 aa	Known RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	MLXIP	Q9HAP2	919 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	VPS45	Q9NRW7	570 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	CTTNBP2NL	Q9P2B4	639 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	ZNF69	Q9UC07	566 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	RGS17	Q9UGC6	210 aa	Predicted RBP	4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	KCNE5	Q9UJ90	142 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	USP22	Q9UPT9	525 aa		4.13	□□□□□ -1.75
SCAPER-213	ENST00000564757	CCDC78	A2IDD5	438 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	GRXCR1	A8MXD5	290 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	TRIM24	O15164	1050 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	KRT38	O76015	456 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	POLB	P06746	335 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	CDK4	P11802	303 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	RXRA	P19793	462 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	KLRK1	P26718	216 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	ADORA2A	P29274	412 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	EPHA3	P29320	983 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	NTSR1	P30989	418 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	DDIT3	P35638	169 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	GATM	P50440	423 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	DDX10	Q13206	875 aa	Known RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	HLX	Q14774	488 aa	Predicted RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	GEN1	Q17RS7	908 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	FBXO47	Q5MNV8	452 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	PAPD7	Q5XG87	772 aa	Known RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	NAIF1	Q69YI7	327 aa	Predicted RBP	4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	MICALCL	Q6ZW33	695 aa		4.12	□□□□□ -1.75
SCAPER-213	ENST00000564757	RRAGA	Q7L523	313 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms