RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SYNCQ9H7C4 482 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ASNSD1Q9NWL6 643 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF236Q9UL36 1845 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 MBLAC1A4D2B0 266 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GMNCA6NCL1 334 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 TRAPPC3O43617 180 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GPR32O75388 356 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 LRCH4O75427 683 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 RASGRP1O95267 797 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 F2P00734 622 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SETSIPP0DME0 302 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 HOXA11P31270 313 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GBP2P32456 591 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 PCK1P35558 622 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 MMP13P45452 471 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 RAP1GAPP47736 663 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 VCPP55072 806 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC25A11Q02978 314 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 OASLQ15646 514 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ZBTB6Q15916 424 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 TMEM95Q3KNT9 176 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ACBD5Q5T8D3 534 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CYP4A22Q5TCH4 519 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 HIBCHQ6NVY1 386 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GSTA5Q7RTV2 222 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CACTIN-AS1Q8N1I8 211 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ALLCQ8N6M5 410 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 LRRC52Q8N7C0 313 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CMASQ8NFW8 434 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 NPLOC4Q8TAT6 608 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 RAPGEF5Q92565 580 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CCT8L2Q96SF2 557 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CPXM1Q96SM3 734 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 PTPN18Q99952 460 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CCDC77Q9BR77 488 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 PHACTR1Q9C0D0 580 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SMYD3Q9H7B4 428 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 PRDM9Q9NQV7 894 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CYTH4Q9UIA0 394 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF148Q9UQR1 794 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 Q9Y3F1 56 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ATXN2Q99700 1313 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 LRRD1A4D1F6 860 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 C3orf70A6NLC5 250 aaPredicted RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 ALG1L2C9J202 215 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 PI4K2BG5E9Z4 385 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 DNALI1O14645 258 aaPredicted RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT10P13645 584 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 TCF4P15884 667 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 FGFR4P22455 802 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 KDELR1P24390 212 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 VARSP26640 1264 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 RDXP35241 583 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 GJC1P36383 396 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 CCT5P48643 541 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF143P52747 638 aaPredicted RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 AUHQ13825 339 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 KAZNQ674X7 775 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 TTC19Q6DKK2 380 aaPredicted RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 FOXR1Q6PIV2 292 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 ALKAL1Q6UXT8 129 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 MICALCLQ6ZW33 695 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 BBS12Q6ZW61 710 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 CATSPER4Q7RTX7 472 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 ANKS1BQ7Z6G8 1248 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 RNF180Q86T96 592 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 NLRP14Q86W24 1093 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 UNC93AQ86WB7 457 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 CCDC25Q86WR0 208 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 ZCCHC9Q8N567 271 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 BEST2Q8NFU1 509 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC35B2Q8TB61 432 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 THAP3Q8WTV1 239 aaPredicted RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 THAP11Q96EK4 314 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 TWNKQ96RR1 684 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 DNAI2Q9GZS0 605 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 TNKS2Q9H2K2 1166 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 SETD4Q9NVD3 440 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 KLK14Q9P0G3 267 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 DNPEPQ9ULA0 475 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 RRP15Q9Y3B9 282 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
HERPUD1-209ENST00000564678 E7EVH7 732 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 GOLGA8SH3BPF8 625 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 M0QYV0 167 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 TULP2O00295 520 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 DYNC1LI2O43237 492 aaPredicted RBP7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 XPOTO43592 962 aaKnown RBP7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 ERBB2P04626 1255 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 ABHD2P08910 425 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 DARSP14868 501 aaKnown RBP7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 NDST1P52848 882 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 ADAM17P78536 824 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 STAT4Q14765 748 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 MORF4L2Q15014 288 aa7.59□□□□□ -1.2
HERPUD1-209ENST00000564678 TRIP13Q15645 432 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms