RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PSG6Q00889 435 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 TIAL1Q01085 375 aaKnown RBP eCLIP5.22□□□□□ -1.57
CHD9-212ENST00000564641 FHL1Q13642 323 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 DEF8Q6ZN54 512 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 LIX1LQ8IVB5 337 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 LINC01465Q8N7H1 131 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 CTHRC1Q96CG8 243 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 B3GNT5Q9BYG0 378 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 ATP6V0A4Q9HBG4 840 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 ZIM2Q9NZV7 527 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 DNMT3BQ9UBC3 853 aaKnown RBP5.22□□□□□ -1.57
CHD9-212ENST00000564641 MGAT4CQ9UBM8 478 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 CFTRP13569 1480 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 TRIM43BA6NCK2 446 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 PYCARD-AS1I3L0S3 204 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 TBX3O15119 743 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 CD3EAPO15446 510 aaKnown RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 INMTO95050 263 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 SNHG28P0DPA3 235 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 CREB1P16220 341 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 DIO1P49895 249 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 HTRA4P83105 476 aaPredicted RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 ZNF260Q3ZCT1 412 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 CACHD1Q5VU97 1274 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 OVCH2Q7RTZ1 564 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 MICU3Q86XE3 530 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 PNISRQ8TF01 805 aaKnown RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 TRIM43Q96BQ3 446 aaPredicted RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 NMD3Q96D46 503 aaKnown RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 HS6ST2Q96MM7 605 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 FAM83DQ9H4H8 585 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 NKX1-2Q9UD57 310 aaPredicted RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 AFF4Q9UHB7 1163 aaKnown RBP5.21□□□□□ -1.58
CHD9-212ENST00000564641 TPCN1Q9ULQ1 816 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 ABCC8Q09428 1581 aa5.21□□□□□ -1.58
CHD9-212ENST00000564641 FNDC1Q4ZHG4 1894 aaPredicted RBP5.2□□□□□ -1.58
CHD9-212ENST00000564641 AQP7P3A6NL99 342 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 TMEM233B4DJY2 109 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 RASSF9O75901 435 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 APEHP13798 732 aaKnown RBP5.2□□□□□ -1.58
CHD9-212ENST00000564641 CFHR3Q02985 330 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 ARHGEF7Q14155 803 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 RBMS2Q15434 407 aaKnown RBP5.2□□□□□ -1.58
CHD9-212ENST00000564641 MINDY4Q4G0A6 757 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 RANBP10Q6VN20 620 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 DCDC5Q6ZRR9 648 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 C16orf71Q8IYS4 520 aaPredicted RBP5.2□□□□□ -1.58
CHD9-212ENST00000564641 CHPFQ8IZ52 775 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 KIAA0319LQ8IZA0 1049 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 OR56A3Q8NH54 315 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 NSMCE1Q8WV22 266 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 STAG1Q8WVM7 1258 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 MAML1Q92585 1016 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 SIGLEC11Q96RL6 698 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 FAM204AQ9H8W3 233 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 C1orf112Q9NSG2 853 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 L1RE1Q9UN81 338 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 WIZO95785 1651 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 PRDM2Q13029 1718 aa5.2□□□□□ -1.58
CHD9-212ENST00000564641 TOP2AP11388 1531 aaKnown RBP5.19□□□□□ -1.58
CHD9-212ENST00000564641 CFAP69A5D8W1 941 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 FAM90A10PA6NDY2 464 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 A8MVJ9 347 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 RRP9O43818 475 aaKnown RBP5.19□□□□□ -1.58
CHD9-212ENST00000564641 BRAFP15056 766 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 PTDSS1P48651 473 aaKnown RBP5.19□□□□□ -1.58
CHD9-212ENST00000564641 GATMP50440 423 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 CACNB3P54284 484 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 SUMO3P55854 103 aaPredicted RBP5.19□□□□□ -1.58
CHD9-212ENST00000564641 KRTAP10-9P60411 292 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 ID2Q02363 134 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 SRSF1Q07955 248 aaKnown RBP eCLIP5.19□□□□□ -1.58
CHD9-212ENST00000564641 RAPGEF1Q13905 1077 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 KCNB1Q14721 858 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 LRRC41Q15345 812 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 ST3GAL2Q16842 350 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 MZT2AQ6P582 158 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 UBE2Q1Q7Z7E8 422 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 MAFAQ8NHW3 353 aaPredicted RBP5.19□□□□□ -1.58
CHD9-212ENST00000564641 IPCEF1Q8WWN9 437 aaPredicted RBP5.19□□□□□ -1.58
CHD9-212ENST00000564641 MAP4K1Q92918 833 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 RUNDC1Q96C34 613 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 C22orf23Q9BZE7 217 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 SACM1LQ9NTJ5 587 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 MTMR4Q9NYA4 1195 aa5.19□□□□□ -1.58
CHD9-212ENST00000564641 ZMYM2Q9UBW7 1377 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 LY6G6EA0A0G2JKS1 128 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 EXOC5O00471 708 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 SPRY2O43597 315 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 PIAS2O75928 621 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 OAZ2O95190 189 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 SCP2P22307 547 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 PGDP52209 483 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 RPS13P62277 151 aaKnown RBP5.18□□□□□ -1.58
CHD9-212ENST00000564641 HSF1Q00613 529 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 SLC29A2Q14542 456 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 CNGA2Q16280 664 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 ZDHHC24Q6UX98 284 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 YAF2Q8IY57 180 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 NRACQ8N912 160 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms