RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NEK8Q86SG6 692 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 KRT78Q8N1N4 520 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 C8orf58Q8NAV2 365 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 PHKBQ93100 1093 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 STRBPQ96SI9 672 aaKnown RBP5.8□□□□□ -1.48
UBR1-205ENST00000564540 PDGFCQ9NRA1 345 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 TFCP2L1Q9NZI6 479 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 ZNF70Q9UC06 446 aaPredicted RBP5.8□□□□□ -1.48
UBR1-205ENST00000564540 ZNF212Q9UDV6 495 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 RGS17Q9UGC6 210 aaPredicted RBP5.8□□□□□ -1.48
UBR1-205ENST00000564540 TUBB4AP04350 444 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 CYP2A6P11509 494 aaPredicted RBP5.79□□□□□ -1.48
UBR1-205ENST00000564540 RPL17P18621 184 aaKnown RBP5.79□□□□□ -1.48
UBR1-205ENST00000564540 PIK3CBP42338 1070 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 SSBP2P81877 361 aaPredicted RBP5.79□□□□□ -1.48
UBR1-205ENST00000564540 AWAT1Q58HT5 328 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 RRAGBQ5VZM2 374 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 USP49Q70CQ1 688 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 SMCR8Q8TEV9 937 aaPredicted RBP5.79□□□□□ -1.48
UBR1-205ENST00000564540 BRIP1Q9BX63 1249 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 SEMA4CQ9C0C4 833 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 FAM83DQ9H4H8 585 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 CHPF2Q9P2E5 772 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 ASAP1Q9ULH1 1129 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 FAM50BQ9Y247 325 aa5.79□□□□□ -1.48
UBR1-205ENST00000564540 ZNF804BA4D1E1 1349 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 RHPN2P1A8MT19 583 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 INMTO95050 263 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 A1BGP04217 495 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 CHRM5P08912 532 aaPredicted RBP5.78□□□□□ -1.48
UBR1-205ENST00000564540 APEHP13798 732 aaKnown RBP5.78□□□□□ -1.48
UBR1-205ENST00000564540 SFPQP23246 707 aaKnown RBP eCLIP5.78□□□□□ -1.48
UBR1-205ENST00000564540 MCM5P33992 734 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 ARHGAP25P42331 645 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 KRTAP10-11P60412 298 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 FAM187BQ17R55 369 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 MANEALQ5VSG8 457 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 SLC2A7Q6PXP3 512 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 CLEC9AQ6UXN8 241 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 RNF44Q7L0R7 432 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 C1QL2Q7Z5L3 287 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 IPCEF1Q8WWN9 437 aaPredicted RBP5.78□□□□□ -1.48
UBR1-205ENST00000564540 TTC17Q96AE7 1141 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 HIST1H2AAQ96QV6 131 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 UNKQ9C0B0 810 aaKnown RBP5.78□□□□□ -1.48
UBR1-205ENST00000564540 MGAT4CQ9UBM8 478 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 DNAJB11Q9UBS4 358 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 VPS51Q9UID3 782 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 HPSEQ9Y251 543 aa5.78□□□□□ -1.48
UBR1-205ENST00000564540 SMIM35A0A1B0GVV1 85 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
UBR1-205ENST00000564540 UBE2Q2LH0YL09 131 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 M0R3H8 397 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 KPNA5O15131 536 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 GCATO75600 419 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 USP1O94782 785 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 MT-CO3P00414 261 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 ANXA2P07355 339 aaKnown RBP5.77□□□□□ -1.49
UBR1-205ENST00000564540 YY1P25490 414 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 DEUP1Q05D60 604 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 KLF9Q13886 244 aaPredicted RBP5.77□□□□□ -1.49
UBR1-205ENST00000564540 DAG1Q14118 895 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 CERKLQ49MI3 558 aaPredicted RBP5.77□□□□□ -1.49
UBR1-205ENST00000564540 KLHDC7AQ5VTJ3 777 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 LIX1LQ8IVB5 337 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 ADAMTS18Q8TE60 1221 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 ZNF668Q96K58 619 aaPredicted RBP5.77□□□□□ -1.49
UBR1-205ENST00000564540 C1QTNF7Q9BXJ2 289 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 PNPLA8Q9NP80 782 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 NRIP3Q9NQ35 241 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 SNX15Q9NRS6 342 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 KLHL13Q9P2N7 655 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 CAPN11Q9UMQ6 739 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 SLC27A6Q9Y2P4 619 aa5.77□□□□□ -1.49
UBR1-205ENST00000564540 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 A0A087WZ62 844 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 KCNU1A8MYU2 1149 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 TP73O15350 636 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 IL18RAPO95256 599 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 ZNF543Q08ER8 600 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 PAPD7Q5XG87 772 aaKnown RBP5.76□□□□□ -1.49
UBR1-205ENST00000564540 CNGA4Q8IV77 575 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 SDR16C5Q8N3Y7 309 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 GALNT16Q8N428 558 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 LINC01465Q8N7H1 131 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 MAFAQ8NHW3 353 aaPredicted RBP5.76□□□□□ -1.49
UBR1-205ENST00000564540 SMG7Q92540 1137 aaKnown RBP5.76□□□□□ -1.49
UBR1-205ENST00000564540 CCDC17Q96LX7 622 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 FYTTD1Q96QD9 318 aaKnown RBP5.76□□□□□ -1.49
UBR1-205ENST00000564540 EFHD1Q9BUP0 239 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 TRIM36Q9NQ86 728 aa5.76□□□□□ -1.49
UBR1-205ENST00000564540 NKX1-2Q9UD57 310 aaPredicted RBP5.76□□□□□ -1.49
UBR1-205ENST00000564540 TMPRSS11DO60235 418 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 SNX2O60749 519 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 SLC5A1P13866 664 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 RBL1P28749 1068 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 ETFDHQ16134 617 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 COBLL1Q53SF7 1204 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 MORN5Q5VZ52 161 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 ZNF425Q6IV72 752 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms