RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 GNA15P30679 374 aa18.21■□□□□ 0.51
USB1-209ENST00000564387 CLCN5P51795 746 aa18.21■□□□□ 0.51
USB1-209ENST00000564387 MLF2Q15773 248 aaPredicted RBP18.21■□□□□ 0.51
USB1-209ENST00000564387 YAF2Q8IY57 180 aa18.21■□□□□ 0.51
USB1-209ENST00000564387 SH3RF2Q8TEC5 729 aa18.21■□□□□ 0.51
USB1-209ENST00000564387 SECISBP2LQ93073 1101 aaKnown RBP18.21■□□□□ 0.51
USB1-209ENST00000564387 RTN4Q9NQC3 1192 aaKnown RBP18.21■□□□□ 0.51
USB1-209ENST00000564387 CNGB3Q9NQW8 809 aa18.21■□□□□ 0.51
USB1-209ENST00000564387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.21■□□□□ 0.51
USB1-209ENST00000564387 THG1LQ9NWX6 298 aaKnown RBP18.21■□□□□ 0.51
USB1-209ENST00000564387 A0A1W2PQH9 124 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 M0QYV0 167 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 EPHB6O15197 1021 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 TLR5O60602 858 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 ZBED1O96006 694 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 ABL1P00519 1130 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 KLK7P49862 253 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 JAM2P57087 298 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 BPIFB4P59827 614 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 UBXN1Q04323 297 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 PTK2Q05397 1052 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 MTF1Q14872 753 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 SYCP1Q15431 976 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 CWF19L1Q69YN2 538 aaKnown RBP18.2■□□□□ 0.5
USB1-209ENST00000564387 ARHGAP18Q8N392 663 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 SHDQ96IW2 340 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 SLC4A5Q9BY07 1137 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 LHX5Q9H2C1 402 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 GKN1Q9NS71 199 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 CA14Q9ULX7 337 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 CPQQ9Y646 472 aa18.2■□□□□ 0.5
USB1-209ENST00000564387 TICRRQ7Z2Z1 1910 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 A0A1B0GTH6 734 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 F8VZ95 297 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 LEFTY2O00292 366 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 DENND1BQ6P3S1 775 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 LUZP1Q86V48 1076 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 SLC47A2Q86VL8 602 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 DDX42Q86XP3 938 aaKnown RBP eCLIP18.19■□□□□ 0.5
USB1-209ENST00000564387 ZNF687Q8N1G0 1237 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 WDTC1Q8N5D0 677 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 OSCP1Q8WVF1 389 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 IRGQQ8WZA9 623 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 MSANTD3Q96H12 275 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 ZFYVE19Q96K21 471 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 ULBP1Q9BZM6 244 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 LRRC4Q9HBW1 653 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 HPS4Q9NQG7 708 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 HEBP1Q9NRV9 189 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 ZNF318Q5VUA4 2279 aa18.19■□□□□ 0.5
USB1-209ENST00000564387 ZDBF2Q9HCK1 2354 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 THAP12O43422 761 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 PNMA6AP0CW24 399 aaPredicted RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 RARGP13631 454 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 AOC1P19801 751 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 ATP5C1P36542 298 aaKnown RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 USP8P40818 1118 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 DAOAP59103 153 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 ADIGQ0VDE8 80 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 RAPGEF1Q13905 1077 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 PDGFRLQ15198 375 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 ASTLQ6HA08 431 aaPredicted RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 TMEM110Q86TL2 294 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 DDX1Q92499 740 aaKnown RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 CDK5RAP1Q96SZ6 601 aaKnown RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 KLF16Q9BXK1 252 aaPredicted RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 TBC1D17Q9HA65 648 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 FAM207AQ9NSI2 230 aaPredicted RBP18.18■□□□□ 0.5
USB1-209ENST00000564387 CYTH4Q9UIA0 394 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 NAGPAQ9UK23 515 aa18.18■□□□□ 0.5
USB1-209ENST00000564387 KANSL1LA0AUZ9 987 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 E2F8A0AVK6 867 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 TEX33O43247 280 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 GREM1O60565 184 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 FBXO21O94952 628 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 TBX18O95935 607 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 MBL2P11226 248 aaPredicted RBP18.17■□□□□ 0.5
USB1-209ENST00000564387 CYP11B1P15538 503 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 POLR2FP61218 127 aaKnown RBP18.17■□□□□ 0.5
USB1-209ENST00000564387 YWHAGP61981 247 aaKnown RBP eCLIP18.17■□□□□ 0.5
USB1-209ENST00000564387 RUNX3Q13761 415 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 NR1I3Q14994 352 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 EML3Q32P44 896 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 CC2D1AQ6P1N0 951 aaPredicted RBP18.17■□□□□ 0.5
USB1-209ENST00000564387 C1orf228Q6PIY5 440 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 TADA2BQ86TJ2 420 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
USB1-209ENST00000564387 NELL2Q99435 816 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 C8orf33Q9H7E9 229 aaPredicted RBP18.17■□□□□ 0.5
USB1-209ENST00000564387 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 DNMT3LQ9UJW3 386 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 COL4A3Q01955 1670 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 KMT2EQ8IZD2 1858 aa18.17■□□□□ 0.5
USB1-209ENST00000564387 A0A1W2PQC6 194 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 OTOL1A6NHN0 477 aaPredicted RBP18.16■□□□□ 0.5
USB1-209ENST00000564387 YJEFN3A6XGL0 299 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 E7ENQ6 273 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 MAN2B1O00754 1011 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 RALAP11233 206 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms