RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 IRF1P10914 325 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 CCDC130P13994 396 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 ADORA2BP29275 332 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 HOXC13P31276 330 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 PSMC2P35998 433 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 ATP5C1P36542 298 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 DPP6P42658 865 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 DHPSP49366 369 aaPredicted RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 SLC8A3P57103 927 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 ZXDBP98169 803 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 KDSRQ06136 332 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 PKP1Q13835 747 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 STPG1Q5TH74 334 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 SNX30Q5VWJ9 437 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 DAB2IPQ5VWQ8 1189 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 RHBDF2Q6PJF5 856 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 LPCAT2Q7L5N7 544 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 FAM186BQ8IYM0 893 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 FUKQ8N0W3 1084 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 CRYBG2Q8N1P7 616 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 ALLCQ8N6M5 410 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 TXNDC5Q8NBS9 432 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 JAKMIP2Q96AA8 810 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 CDK5RAP1Q96SZ6 601 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 NT5C1AQ9BXI3 368 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 CCSER2Q9H7U1 834 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 MMRN2Q9H8L6 949 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 SPHK2Q9NRA0 654 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 POLR3BQ9NW08 1133 aaPredicted RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 GMIPQ9P107 970 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 WDR35Q9P2L0 1181 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 TRAF3IP3Q9Y228 551 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 INVSQ9Y283 1065 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 NME7Q9Y5B8 376 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 SPAG17Q6Q759 2223 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 BCLAF3A2AJT9 711 aaKnown RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 TNFRSF10BO14763 440 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 DCLK1O15075 740 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 RHOBTB3O94955 611 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 CD58P19256 250 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 ACO1P21399 889 aaKnown RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 SLC6A11P48066 632 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 GCLMP48507 274 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 PSEN1P49768 467 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 DLG4P78352 724 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 ENPEPQ07075 957 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 ORC1Q13415 861 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 ADAM9Q13443 819 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 PLA2G2CQ5R387 149 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 C10orf76Q5T2E6 689 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 PAQR9Q6ZVX9 377 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 GUF1Q8N442 669 aaKnown RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 ZNF513Q8N8E2 541 aaPredicted RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 NAT16Q8N8M0 369 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 PLEKHO2Q8TD55 490 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 HMGB4Q8WW32 186 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 EZH1Q92800 747 aaPredicted RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 CYFIP2Q96F07 1278 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 HNRNPABQ99729 332 aaKnown RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 SMOQ99835 787 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 DUSP9Q99956 384 aaKnown RBP10.09□□□□□ -0.79
CLN6-203ENST00000563917 EDEM2Q9BV94 578 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 NIF3L1Q9GZT8 377 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 SDCBP2Q9H190 292 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 CSNK1G1Q9HCP0 422 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 TMEM30AQ9NV96 361 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 RMND1Q9NWS8 449 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 IL37Q9NZH6 218 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 MAPK8IP1Q9UQF2 711 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 SCML2Q9UQR0 700 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 HPSEQ9Y251 543 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 PCDHA5Q9Y5H7 936 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
CLN6-203ENST00000563917 FRYLO94915 3013 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 A0A1W2PQ27 194 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 A0A1W2PQ64 194 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 A0A1W2PQD8 194 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 FAM92AA1XBS5 289 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 CETN3O15182 167 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 HOXC11O43248 304 aaPredicted RBP10.08□□□□□ -0.8
CLN6-203ENST00000563917 ZDHHC11BP0C7U3 371 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 EPB41P11171 864 aaKnown RBP10.08□□□□□ -0.8
CLN6-203ENST00000563917 RALAP11233 206 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 GTF2H1P32780 548 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 ASPAP45381 313 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 PLA2G4AP47712 749 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 NDUFA8P51970 172 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 INCA1Q0VD86 236 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 E2F5Q15329 346 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 NFIL3Q16649 462 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 C10orf120Q5SQS8 335 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 PMS2CLQ68D20 193 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 KRT39Q6A163 491 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 GRAMD4Q6IC98 578 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 SPOPLQ6IQ16 392 aa10.08□□□□□ -0.8
CLN6-203ENST00000563917 KRBA2Q6ZNG9 492 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms