RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 RFC5P40937 340 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 NPEPPSP55786 919 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 ZXDBP98169 803 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 MRPL49Q13405 166 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 MGAT5BQ3V5L5 792 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 XYLT1Q86Y38 959 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 OXR1Q8N573 874 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 SIPA1Q96FS4 1042 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 CATSPER2Q96P56 530 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 OSBPL2Q9H1P3 480 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 ERVMER34-1Q9H9K5 563 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 TRPC7Q9HCX4 862 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 DEC1Q9P2X7 70 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 GDAQ9Y2T3 454 aa11.52□□□□□ -0.57
HDGFL3-204ENST00000563790 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 TTLL8A6PVC2 850 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 M0QZQ0 153 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 SLC9A3R1O14745 358 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 CHMP2AO43633 222 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 ACSL1P33121 698 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 GRIK1P39086 918 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 TFDP1Q14186 410 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 STARD3Q14849 445 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 TMPRSS6Q8IU80 811 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 NOSTRINQ8IVI9 506 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 TP53INP2Q8IXH6 220 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 ARL14EPQ8N8R7 260 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 KRT23Q9C075 422 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 UNC45AQ9H3U1 944 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 PDZD7Q9H5P4 517 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 RIC8AQ9NPQ8 531 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 SLC38A7Q9NVC3 462 aa11.51□□□□□ -0.57
HDGFL3-204ENST00000563790 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 WASH3PC4AMC7 463 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 TGM2P21980 687 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 BCAT1P54687 386 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 DMP1Q13316 513 aaPredicted RBP11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 EMC2Q15006 297 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 FAM124AQ86V42 546 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 MAPK15Q8TD08 544 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 PRCCQ92733 491 aaPredicted RBP11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 SLC6A18Q96N87 628 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 RIT2Q99578 217 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 TP53TG5Q9Y2B4 290 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 MAP4K5Q9Y4K4 846 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 AKAP6Q13023 2319 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 SCN1AP35498 2009 aa11.5□□□□□ -0.57
HDGFL3-204ENST00000563790 LEFTY2O00292 366 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 NVLO15381 856 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 PPP1R37O75864 691 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 P4HBP07237 508 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 ACADMP11310 421 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 LEPRP48357 1165 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 ZNF132P52740 706 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 CAPSQ13938 189 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 GSE1Q14687 1217 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 PRR16Q569H4 304 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 LY6G5CQ5SRR4 150 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 RBM44Q6ZP01 1051 aaKnown RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 CDH24Q86UP0 819 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 ZNF589Q86UQ0 364 aaPredicted RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 DTX1Q86Y01 620 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 GLIS1Q8NBF1 620 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 OR4C6Q8NH72 309 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 LENG9Q96B70 501 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 TIMM13Q9Y5L4 95 aaPredicted RBP11.49□□□□□ -0.57
HDGFL3-204ENST00000563790 EFCAB7A8K855 629 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 PLD2O14939 933 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 GAS7O60861 476 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 FSBPO95073 299 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 SEMA4FO95754 770 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 HDCP19113 662 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 CLK2P49760 499 aaKnown RBP11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 GAD2Q05329 585 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 KCNB1Q14721 858 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 MIER3Q7Z3K6 550 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 NAT16Q8N8M0 369 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 GSX1Q9H4S2 264 aaPredicted RBP11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 UXTQ9UBK9 157 aaPredicted RBP11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 METRNQ9UJH8 293 aa11.48□□□□□ -0.57
HDGFL3-204ENST00000563790 CACNA1CQ13936 2221 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms