RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 KRT7P08729 469 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 LINC00271P0C7V0 271 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 MIPP30301 263 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 PCK1P35558 622 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 GPR15P49685 360 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 SH3PXD2AQ5TCZ1 1133 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 SDHAF4Q5VUM1 108 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 POLNQ7Z5Q5 900 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 SPATA4Q8NEY3 305 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 IRGQQ8WZA9 623 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 UBXN4Q92575 508 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 CLSTN3Q9BQT9 956 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 PCSK1NQ9UHG2 260 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 STAP1Q9ULZ2 295 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 USP18Q9UMW8 372 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 LCHNA4D1U4 455 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 TNFRSF10BO14763 440 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 CTIFO43310 598 aaKnown RBP22.96■■□□□ 1.27
LINC01960-201ENST00000563759 KRT1P04264 644 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 DUSP4Q13115 394 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 LONRF2Q1L5Z9 754 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 SMTNL2Q2TAL5 461 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 PM20D1Q6GTS8 502 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 HFE2Q6ZVN8 426 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 SCML4Q8N228 414 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 DDX23Q9BUQ8 820 aaKnown RBP22.96■■□□□ 1.27
LINC01960-201ENST00000563759 MRPL17Q9NRX2 175 aaKnown RBP22.96■■□□□ 1.27
LINC01960-201ENST00000563759 DDX56Q9NY93 547 aaKnown RBP22.96■■□□□ 1.27
LINC01960-201ENST00000563759 TTC7AQ9ULT0 858 aaPredicted RBP22.96■■□□□ 1.27
LINC01960-201ENST00000563759 NR2E3Q9Y5X4 410 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 USP3Q9Y6I4 520 aa22.96■■□□□ 1.27
LINC01960-201ENST00000563759 SOAT2O75908 522 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 VNN2O95498 520 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 CA8P35219 290 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 CTNNB1P35222 781 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 SULT1E1P49888 294 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 ITIH3Q06033 890 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 NUP93Q8N1F7 819 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 EXD1Q8NHP7 514 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 RBM41Q96IZ5 413 aaKnown RBP22.95■■□□□ 1.26
LINC01960-201ENST00000563759 SLC2A13Q96QE2 648 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 NCAPGQ9BPX3 1015 aa22.95■■□□□ 1.26
LINC01960-201ENST00000563759 PRPSAP2O60256 369 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 ZRANB2O95218 330 aaKnown RBP eCLIP22.94■■□□□ 1.26
LINC01960-201ENST00000563759 IL1R2P27930 398 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 NOS2P35228 1153 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 SLC25A52Q3SY17 297 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 ATP13A4Q4VNC1 1196 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 RASIP1Q5U651 963 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 TXNRD3NBQ6F5E7 133 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 SCYL2Q6P3W7 929 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 KLHL23Q8NBE8 558 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 STKLD1Q8NE28 680 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 AUTS2Q8WXX7 1259 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 ACSF2Q96CM8 615 aaPredicted RBP22.94■■□□□ 1.26
LINC01960-201ENST00000563759 TRIM62Q9BVG3 475 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 CRISPLD1Q9H336 500 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 KRIT1O00522 736 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 HAPLN1P10915 354 aaPredicted RBP22.94■■□□□ 1.26
LINC01960-201ENST00000563759 NCAM1P13591 858 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 TFE3P19532 575 aaPredicted RBP22.94■■□□□ 1.26
LINC01960-201ENST00000563759 RAB6CQ53S08 254 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 KCNT1Q5JUK3 1230 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 BHLHA9Q7RTU4 235 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 NOA1Q8NC60 698 aaKnown RBP22.94■■□□□ 1.26
LINC01960-201ENST00000563759 TBCBQ99426 244 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 RAB6CQ9H0N0 254 aa22.94■■□□□ 1.26
LINC01960-201ENST00000563759 RBM12Q9NTZ6 932 aaKnown RBP22.94■■□□□ 1.26
LINC01960-201ENST00000563759 COL4A4P53420 1690 aaPredicted RBP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 CETN2P41208 172 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 HDAC4P56524 1084 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 RPL10AP62906 217 aaKnown RBP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 CREMQ03060 361 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 C9orf50Q5SZB4 431 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 RSRC2Q7L4I2 434 aaKnown RBP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 ADAT2Q7Z6V5 191 aaKnown RBP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 GPR152Q8TDT2 470 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 C11orf84Q9BUA3 381 aaPredicted RBP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 AP1M1Q9BXS5 423 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 FBXO44Q9H4M3 255 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 AFF4Q9UHB7 1163 aaKnown RBP22.93■■□□□ 1.26
LINC01960-201ENST00000563759 NAALADL1Q9UQQ1 740 aa22.93■■□□□ 1.26
LINC01960-201ENST00000563759 GOLGA6L10A0A0M3HER8 536 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 LRRD1A4D1F6 860 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 PI4K2BG5E9Z4 385 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 TRUB2O95900 331 aaKnown RBP22.92■■□□□ 1.26
LINC01960-201ENST00000563759 MAGEA10P43363 369 aaPredicted RBP22.92■■□□□ 1.26
LINC01960-201ENST00000563759 TUBB4BP68371 445 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 ERCC6LQ2NKX8 1250 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 SYPL2Q5VXT5 272 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 DENND5BQ6ZUT9 1274 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 STRADAQ7RTN6 431 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 ZNF461Q8TAF7 563 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 HSPH1Q92598 858 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 RNF25Q96BH1 459 aaPredicted RBP22.92■■□□□ 1.26
LINC01960-201ENST00000563759 PEBP4Q96S96 227 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 ZBP1Q9H171 429 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 RWDD3Q9Y3V2 267 aa22.92■■□□□ 1.26
LINC01960-201ENST00000563759 LLGL1Q15334 1064 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms