RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CSDE1O75534 798 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 LSM8O95777 96 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ANPEPP15144 967 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 TGFB2P61812 414 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 RPL10AP62906 217 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 AP1B1Q10567 949 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 TTLL6Q8N841 843 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 RDM1Q8NG50 284 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 PRPF31Q8WWY3 499 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 WDR83Q9BRX9 315 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 PHACTR1Q9C0D0 580 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 MED7O43513 233 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 LYPLA1O75608 230 aaPredicted RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 NPTXRO95502 500 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 FESP07332 822 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 RARBP10826 455 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 KCNA2P16389 499 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 NAMPTP43490 491 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 PDE1BQ01064 536 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 HIC1Q14526 733 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 GSTCDQ8NEC7 633 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 SKA1Q96BD8 255 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 MMP19Q99542 508 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 KCNK13Q9HB14 408 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ASNSD1Q9NWL6 643 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ZNF212Q9UDV6 495 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 TAGLN3Q9UI15 199 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 APOC4-APOC2K7ER74 178 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 VWA5AO00534 786 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 APOC2P02655 101 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ETS2P15036 469 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 RBL1P28749 1068 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 DSG1Q02413 1049 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 TFDP2Q14188 446 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 WDR75Q8IWA0 830 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 KBTBD2Q8IY47 623 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ULK2Q8IYT8 1036 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 ATXN7L3BQ96GX2 97 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 NRBP2Q9NSY0 501 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 TXNDC16Q9P2K2 825 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 PACSIN3Q9UKS6 424 aa12.28□□□□□ -0.44
ABCA3-203ENST00000563623 RPL26L1Q9UNX3 145 aaKnown RBP12.28□□□□□ -0.44
ABCA3-203ENST00000563623 SIGLEC16A6NMB1 481 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 OCRLQ01968 901 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 ASPHQ12797 758 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 TBC1D25Q3MII6 688 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 RAB6CQ53S08 254 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 POLNQ7Z5Q5 900 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 PPP1R36Q96LQ0 422 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 EBF4Q9BQW3 602 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.44
ABCA3-203ENST00000563623 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 PORCNQ9H237 461 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 RSAD1Q9HA92 442 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 SSU72Q9NP77 194 aaKnown RBP12.27□□□□□ -0.44
ABCA3-203ENST00000563623 DNAJC16Q9Y2G8 782 aa12.27□□□□□ -0.44
ABCA3-203ENST00000563623 ANKRD33BA6NCL7 494 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 PEX10O60683 326 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 EDN1P05305 212 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 PRKCBP05771 671 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 CWF19L1Q69YN2 538 aaKnown RBP12.27□□□□□ -0.45
ABCA3-203ENST00000563623 ARHGAP22Q7Z5H3 698 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 BRSK2Q8IWQ3 736 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 PHC3Q8NDX5 983 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 TLE6Q9H808 572 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.45
ABCA3-203ENST00000563623 APOBEC2Q9Y235 224 aaKnown RBP12.27□□□□□ -0.45
ABCA3-203ENST00000563623 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.45
ABCA3-203ENST00000563623 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
ABCA3-203ENST00000563623 hCG_2014768A0A024R1R8 64 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ZMPSTE24O75844 475 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 KCNA4P22459 653 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 EIF4BP23588 611 aaKnown RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 IGBP1P78318 339 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 CRADDP78560 199 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ROR2Q01974 943 aaKnown RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 CAPSQ13938 189 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 PPP2R5DQ14738 602 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 RABGAP1LQ5R372 815 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 DENND5BQ6ZUT9 1274 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 NETO2Q8NC67 525 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 TMEM174Q8WUU8 243 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 RXFP2Q8WXD0 754 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 SEPT10Q9P0V9 454 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms