RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ORC1Q13415 861 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 BIRC3Q13489 604 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 NCOA4Q13772 614 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 MAP7D1Q3KQU3 841 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 HSF5Q4G112 596 aaPredicted RBP17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 RESP18Q5W5W9 173 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 ACOT1Q86TX2 421 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 KIAA0895Q8NCT3 520 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 PIGKQ92643 395 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 DMAP1Q9NPF5 467 aaPredicted RBP17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 HMGXB4Q9UGU5 601 aa17.81■□□□□ 0.44
HDGFL3-203ENST00000563404 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 HOXC11O43248 304 aaPredicted RBP17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 GREM1O60565 184 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 AP1G2O75843 785 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 ALDH1A2O94788 518 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 CCDC130P13994 396 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 PTGER3P43115 390 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 TUBP50607 506 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 GAD2Q05329 585 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 ZNF667Q5HYK9 610 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 EOGTQ5NDL2 527 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 SH3PXD2AQ5TCZ1 1133 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 ARMCX6Q7L4S7 300 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 TMEM25Q86YD3 366 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 TMEFF1Q8IYR6 380 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 HMGB4Q8WW32 186 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 OTUB2Q96DC9 234 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 SMARCD1Q96GM5 515 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 TMEM9BQ9NQ34 198 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 KRT82Q9NSB4 513 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 TMEM74BQ9NUR3 256 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 SERTAD1Q9UHV2 236 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 WASF3Q9UPY6 502 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 SH3BP1Q9Y3L3 701 aa17.8■□□□□ 0.44
HDGFL3-203ENST00000563404 TNRC6BQ9UPQ9 1833 aaKnown RBP17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 CHD6Q8TD26 2715 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 ATP8B3O60423 1300 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 TCRBV21S2A2A0A5A6 115 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 TULP3O75386 442 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 TBX18O95935 607 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 IRF1P10914 325 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 DAB2IPQ5VWQ8 1189 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 MIB1Q86YT6 1006 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 SLC2A14Q8TDB8 520 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 WHAMMQ8TF30 809 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 TNIP3Q96KP6 325 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 DUSP9Q99956 384 aaKnown RBP17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 KCTD10Q9H3F6 313 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 POLMQ9NP87 494 aaPredicted RBP17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 SPHK2Q9NRA0 654 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 FAM13BQ9NYF5 915 aa17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
HDGFL3-203ENST00000563404 TBC1D3BA6NDS4 549 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 ACTN4O43707 911 aaKnown RBP17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 F13A1P00488 732 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 ZSCAN22P10073 491 aaPredicted RBP17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 ME1P48163 572 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 NDST1P52848 882 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 AP3M2P53677 418 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 PKP1Q13835 747 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 ZACNQ401N2 412 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 C1orf220Q5T0J3 134 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 SPOPLQ6IQ16 392 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 LPCAT2Q7L5N7 544 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 GPRIN1Q7Z2K8 1008 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 SLC9A9Q8IVB4 645 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 CRYBG2Q8N1P7 616 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 C12orf29Q8N999 325 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 GOLGA5Q8TBA6 731 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 TMEM174Q8WUU8 243 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 CSNK1G1Q9HCP0 422 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 COMMD8Q9NX08 183 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 OSER1Q9NX31 292 aa17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 BCCIPQ9P287 314 aaKnown RBP eCLIP17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 EVLQ9UI08 416 aaPredicted RBP17.78■□□□□ 0.44
HDGFL3-203ENST00000563404 ATXN2Q99700 1313 aaKnown RBP17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 PLXND1Q9Y4D7 1925 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 MYO18AQ92614 2054 aaKnown RBP17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 TLR5O60602 858 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 CLSTN1O94985 981 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 TOP3BO95985 862 aaKnown RBP17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 ASPAP45381 313 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 MAP3K7CLP57077 242 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 ZNF252P-AS1Q0IIN9 211 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 ANO4Q32M45 955 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 KMT5BQ4FZB7 885 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 TRIM61Q5EBN2 209 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 ZNF513Q8N8E2 541 aaPredicted RBP17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 TERB1Q8NA31 727 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 PAGE5Q96GU1 130 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 SPACA7Q96KW9 195 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 TWNKQ96RR1 684 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 KLF16Q9BXK1 252 aaPredicted RBP17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 CD248Q9HCU0 757 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 FAM49BQ9NUQ9 324 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 DEC1Q9P2X7 70 aa17.77■□□□□ 0.44
HDGFL3-203ENST00000563404 WDFY3Q8IZQ1 3526 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 C1QTNF9BB2RNN3 333 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms