RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ABLIM1O14639 778 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 ATP6V1G1O75348 118 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 KLHL2O95198 593 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 ATE1O95260 518 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 KRT14P02533 472 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 EPHX1P07099 455 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 TXNP10599 105 aaKnown RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 POU2F1P14859 743 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 AOAHP28039 575 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 TM4SF1P30408 202 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 NF2P35240 595 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 KRT2P35908 639 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 TXLNAP40222 546 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 GCLCP48506 637 aaPredicted RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 PCP4P48539 62 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 KCNC1P48547 511 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 AFF1P51825 1210 aaKnown RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 MFAP3P55082 362 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 ADKP55263 362 aaKnown RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 HUNKP57058 714 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 RPP30P78346 268 aaKnown RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 GRSF1Q12849 480 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMG1-207ENST00000563235 CUL1Q13616 776 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 KCNC3Q14003 757 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 STK38Q15208 465 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 ZNF124Q15973 351 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 PROX2Q3B8N5 592 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 Q3ZCU0 254 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 FAXCQ5TGI0 409 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 MIS18BP1Q6P0N0 1132 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 NOTUMQ6P988 496 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 SASS6Q6UVJ0 657 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 ATG14Q6ZNE5 492 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 SPATA21Q7Z572 469 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 CPLX4Q7Z7G2 160 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 MRPL10Q7Z7H8 261 aaKnown RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 TADA2BQ86TJ2 420 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 STK32CQ86UX6 486 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 SESTD1Q86VW0 696 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 HDDC3Q8N4P3 179 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 OR52M1Q8NGK5 317 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 GDAP1L1Q96MZ0 367 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 GBP5Q96PP8 586 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 TRIM62Q9BVG3 475 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 DENND2DQ9H6A0 471 aaPredicted RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 ARMT1Q9H993 441 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 UCKL1Q9NWZ5 548 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 CNOT11Q9UKZ1 510 aaKnown RBP5.01□□□□□ -1.61
SMG1-207ENST00000563235 NCOA3Q9Y6Q9 1424 aa5.01□□□□□ -1.61
SMG1-207ENST00000563235 MAGEB16A2A368 324 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SMIM30A4D0T7 59 aa5□□□□□ -1.61
SMG1-207ENST00000563235 STX16-NPEPL1H3BU86 382 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CXCL11O14625 94 aa5□□□□□ -1.61
SMG1-207ENST00000563235 LSM1O15116 133 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 ST8SIA5O15466 376 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CIDEAO60543 219 aa5□□□□□ -1.61
SMG1-207ENST00000563235 NDUFS2O75306 463 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SURF6O75683 361 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 DGAT1O75907 488 aa5□□□□□ -1.61
SMG1-207ENST00000563235 DIRAS3O95661 229 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CAVIN2O95810 425 aa5□□□□□ -1.61
SMG1-207ENST00000563235 EPB41P11171 864 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 ANXA8P13928 327 aa5□□□□□ -1.61
SMG1-207ENST00000563235 PDE6AP16499 860 aa5□□□□□ -1.61
SMG1-207ENST00000563235 YBX3P16989 372 aaKnown RBP eCLIP5□□□□□ -1.619e-6■■■□□ 18.1
SMG1-207ENST00000563235 JUNDP17535 347 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ADSSP30520 456 aa5□□□□□ -1.61
SMG1-207ENST00000563235 STAT5AP42229 794 aa5□□□□□ -1.61
SMG1-207ENST00000563235 COTL1Q14019 142 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ANXA8L1Q5VT79 327 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CIAPIN1Q6FI81 312 aa5□□□□□ -1.61
SMG1-207ENST00000563235 OVOS1Q6IE37 1185 aa5□□□□□ -1.61
SMG1-207ENST00000563235 METTL23Q86XA0 190 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FAM217AQ8IXS0 508 aa5□□□□□ -1.61
SMG1-207ENST00000563235 MRPL43Q8N983 215 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 TDRD5Q8NAT2 981 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 C3orf20Q8ND61 904 aa5□□□□□ -1.61
SMG1-207ENST00000563235 POC1BQ8TC44 478 aa5□□□□□ -1.61
SMG1-207ENST00000563235 TSPEARQ8WU66 669 aa5□□□□□ -1.61
SMG1-207ENST00000563235 FAM83CQ9BQN1 747 aa5□□□□□ -1.61
SMG1-207ENST00000563235 UPF2Q9HAU5 1272 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 TMOD2Q9NZR1 351 aa5□□□□□ -1.61
SMG1-207ENST00000563235 EMC3Q9P0I2 261 aa5□□□□□ -1.61
SMG1-207ENST00000563235 TRPS1Q9UHF7 1281 aa5□□□□□ -1.61
SMG1-207ENST00000563235 STK38LQ9Y2H1 464 aa5□□□□□ -1.61
SMG1-207ENST00000563235 ROCK2O75116 1388 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 A2ML1A8K2U0 1454 aa5□□□□□ -1.61
SMG1-207ENST00000563235 DNMT1P26358 1616 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 DIP2CQ9Y2E4 1556 aa5□□□□□ -1.61
SMG1-207ENST00000563235 CGNL1Q0VF96 1302 aa5□□□□□ -1.61
SMG1-207ENST00000563235 UQCRHLA0A096LP55 91 aa5□□□□□ -1.61
SMG1-207ENST00000563235 C15orf38-AP3S2A0A0A6YYH1 394 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SERTM2A0A1B0GWG4 89 aa5□□□□□ -1.61
SMG1-207ENST00000563235 METTL12A8MUP2 240 aa5□□□□□ -1.61
SMG1-207ENST00000563235 SOCS6O14544 535 aa5□□□□□ -1.61
SMG1-207ENST00000563235 DVL2O14641 736 aa5□□□□□ -1.61
SMG1-207ENST00000563235 HNRNPRO43390 633 aaKnown RBP5□□□□□ -1.61
SMG1-207ENST00000563235 KRT86O43790 486 aa5□□□□□ -1.61
SMG1-207ENST00000563235 LRRN2O75325 713 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms