RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 SPHK2Q9NRA0 654 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SLC6A14Q9UN76 642 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 WASF3Q9UPY6 502 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 USP24Q9UPU5 2620 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 TMEM8BA6NDV4 472 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 STX6O43752 255 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 HOXD12P35452 270 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 AP3M2P53677 418 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 DUOXA1Q1HG43 343 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 ZNF699Q32M78 642 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 C10orf76Q5T2E6 689 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 SDE2Q6IQ49 451 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 TMEM25Q86YD3 366 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 BBS7Q8IWZ6 715 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 ETFBKMTQ8IXQ9 262 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 C12orf56Q8IXR9 622 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 PHTF2Q8N3S3 785 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 HDDC3Q8N4P3 179 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 SMARCD1Q96GM5 515 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 DUSP9Q99956 384 aaKnown RBP17.57■□□□□ 0.4
CMTM3-205ENST00000562707 SCNM1Q9BWG6 230 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 SMYD3Q9H7B4 428 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 CCSER2Q9H7U1 834 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 VRTNQ9H8Y1 702 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 IL37Q9NZH6 218 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 GMIPQ9P107 970 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 PILRBQ9UKJ0 227 aa17.57■□□□□ 0.4
CMTM3-205ENST00000562707 CUTAO60888 179 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 AP1G2O75843 785 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 TOP3BO95985 862 aaKnown RBP17.56■□□□□ 0.4
CMTM3-205ENST00000562707 IRF1P10914 325 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 HOXB2P14652 356 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 ITPKAP23677 461 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 NTSR1P30989 418 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 RPL6Q02878 288 aaKnown RBP17.56■□□□□ 0.4
CMTM3-205ENST00000562707 GFPT1Q06210 699 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-205ENST00000562707 GRAMD4Q6IC98 578 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 PAQR9Q6ZVX9 377 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 TERB1Q8NA31 727 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 RALYQ9UKM9 306 aaKnown RBP17.56■□□□□ 0.4
CMTM3-205ENST00000562707 EML5Q05BV3 1969 aa17.56■□□□□ 0.4
CMTM3-205ENST00000562707 ATXN2Q99700 1313 aaKnown RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 ZDHHC11BP0C7U3 371 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 P4HA1P13674 534 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 GABRG2P18507 467 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 RDXP35241 583 aaKnown RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 WASP42768 502 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 CASP4P49662 377 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 NCOA4Q13772 614 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 KNOP1Q1ED39 458 aaKnown RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 PEAR1Q5VY43 1037 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 SHC4Q6S5L8 630 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 SCARA5Q6ZMJ2 495 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 RABEPKQ7Z6M1 372 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 DEFB119Q8N690 84 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 GOLGA5Q8TBA6 731 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 XPO6Q96QU8 1125 aaKnown RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 GTPBP2Q9BX10 602 aaKnown RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-205ENST00000562707 BLZF1Q9H2G9 400 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 FBXO44Q9H4M3 255 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
CMTM3-205ENST00000562707 PVALEFA0A1B0GWK0 134 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 FAM92AA1XBS5 289 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 UPK3BL1B0FP48 263 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 UPK3BL2E5RIL1 263 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 POLR2DO15514 142 aaKnown RBP17.54■□□□□ 0.4
CMTM3-205ENST00000562707 TLR5O60602 858 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 ZNF217O75362 1048 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 YEATS4O95619 227 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 SERPINF2P08697 491 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 TRIM21P19474 475 aaKnown RBP17.54■□□□□ 0.4
CMTM3-205ENST00000562707 EHHADHQ08426 723 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 GOLGA8FQ08AF8 430 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 GOLGA8DPQ0D2H9 430 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 SEMA3BQ13214 749 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 BMT2Q1RMZ1 405 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 KIAA1211LQ6NV74 962 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 HTR3DQ70Z44 454 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 ACOT1Q86TX2 421 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 CHPFQ8IZ52 775 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 FUKQ8N0W3 1084 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 PARD3BQ8TEW8 1205 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 TMEM121BQ9BXQ6 578 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-205ENST00000562707 TLR8Q9NR97 1041 aaKnown RBP17.54■□□□□ 0.4
CMTM3-205ENST00000562707 KRT82Q9NSB4 513 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 DNAJC17Q9NVM6 304 aaKnown RBP17.54■□□□□ 0.4
CMTM3-205ENST00000562707 CALCOCO1Q9P1Z2 691 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 WDR35Q9P2L0 1181 aa17.54■□□□□ 0.4
CMTM3-205ENST00000562707 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
CMTM3-205ENST00000562707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-205ENST00000562707 C4BPAP04003 597 aaKnown RBP17.53■□□□□ 0.4
CMTM3-205ENST00000562707 ATP5C1P36542 298 aaKnown RBP17.53■□□□□ 0.4
CMTM3-205ENST00000562707 SIM1P81133 766 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-205ENST00000562707 ZNF33AQ06730 810 aa17.53■□□□□ 0.4
CMTM3-205ENST00000562707 SGSM1Q2NKQ1 1148 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms