RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 SURF6O75683 361 aaKnown RBP5.5□□□□□ -1.53
SMG1-206ENST00000562668 IGHDP01880 384 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 ADORA1P30542 326 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 GYG1P46976 350 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 PROK1P58294 105 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 TIMM10P62072 90 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 FOXF2Q12947 444 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 ACAP2Q15057 778 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 PUM3Q15397 648 aaKnown RBP5.5□□□□□ -1.53
SMG1-206ENST00000562668 PREPLQ4J6C6 727 aaPredicted RBP5.5□□□□□ -1.53
SMG1-206ENST00000562668 FLYWCH1Q4VC44 716 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 DDX42Q86XP3 938 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMG1-206ENST00000562668 ADGRG5Q8IZF4 528 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 CERS5Q8N5B7 392 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 IL17RDQ8NFM7 739 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 LPIN2Q92539 896 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 FBXL20Q96IG2 436 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 EYA3Q99504 573 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 COA1Q9GZY4 146 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 CD209Q9NNX6 404 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 VSX1Q9NZR4 365 aaPredicted RBP5.5□□□□□ -1.53
SMG1-206ENST00000562668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.5□□□□□ -1.53
SMG1-206ENST00000562668 IPPQ9Y573 584 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 ENTPD2Q9Y5L3 495 aa5.5□□□□□ -1.53
SMG1-206ENST00000562668 FAM205AQ6ZU69 1335 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 CCDC195A0A1B0GUA6 201 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 SHTN1A0MZ66 631 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 PSMD14O00487 310 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 SLC43A1O75387 559 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 DDNO94850 711 aaPredicted RBP5.49□□□□□ -1.53
SMG1-206ENST00000562668 SUN1O94901 812 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 PHKA1P46020 1223 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 ANXA11P50995 505 aaKnown RBP5.49□□□□□ -1.53
SMG1-206ENST00000562668 ZNF280AP59817 542 aaPredicted RBP5.49□□□□□ -1.53
SMG1-206ENST00000562668 MC2RQ01718 297 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 TLE1Q04724 770 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 FPGSQ05932 587 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 PIGFQ07326 219 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 G3BP1Q13283 466 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMG1-206ENST00000562668 EGFLAMQ63HQ2 1017 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 KAZNQ674X7 775 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 GADL1Q6ZQY3 521 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 SMC5Q8IY18 1101 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
SMG1-206ENST00000562668 GPC2Q8N158 579 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 TMIEQ8NEW7 156 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 SLC30A5Q8TAD4 765 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 TFAP2BQ92481 460 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 SARAFQ96BY9 339 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 MRGPRX4Q96LA9 322 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 MXD3Q9BW11 206 aa5.49□□□□□ -1.53
SMG1-206ENST00000562668 TMX4Q9H1E5 349 aaPredicted RBP5.49□□□□□ -1.53
SMG1-206ENST00000562668 DBNLQ9UJU6 430 aaKnown RBP5.49□□□□□ -1.53
SMG1-206ENST00000562668 ECM29Q5VYK3 1845 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 MAST2Q6P0Q8 1798 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 TOR1BO14657 336 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 HTRA2O43464 458 aaPredicted RBP5.48□□□□□ -1.53
SMG1-206ENST00000562668 XPOTO43592 962 aaKnown RBP5.48□□□□□ -1.53
SMG1-206ENST00000562668 HMMRO75330 724 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 SLC5A1P13866 664 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 WT1P19544 449 aaPredicted RBP5.48□□□□□ -1.53
SMG1-206ENST00000562668 GPD1P21695 349 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 YY1P25490 414 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 GRIA3P42263 894 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 FKBP1AP62942 108 aaKnown RBP5.48□□□□□ -1.53
SMG1-206ENST00000562668 DYRK1AQ13627 763 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 IL10RAQ13651 578 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 ABCB5Q2M3G0 1257 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 C3orf36Q3SXR2 165 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 CD300EQ496F6 205 aaPredicted RBP5.48□□□□□ -1.53
SMG1-206ENST00000562668 PPP4R3AQ6IN85 833 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 PDPRQ8NCN5 879 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 TOR1AIP2Q8NFQ8 470 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 MYCBPAPQ8TBZ2 947 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 JDP2Q8WYK2 163 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 SNX19Q92543 992 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 PGBD1Q96JS3 809 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 TIMP4Q99727 224 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 IMPG2Q9BZV3 1241 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 NMRK2Q9NPI5 230 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 CALCOCO1Q9P1Z2 691 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 SLC45A2Q9UMX9 530 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 LIMCH1Q9UPQ0 1083 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 PDS5AQ29RF7 1337 aaKnown RBP5.48□□□□□ -1.53
SMG1-206ENST00000562668 SALL1Q9NSC2 1324 aa5.48□□□□□ -1.53
SMG1-206ENST00000562668 KLHL33A6NCF5 533 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 CCDC154A6NI56 674 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 IFIT1P09914 478 aaKnown RBP5.47□□□□□ -1.53
SMG1-206ENST00000562668 PPP3CBP16298 524 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 GATA3P23771 443 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 EDNRBP24530 442 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 EPS15P42566 896 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 KCNJ4P48050 445 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 GMPSP49915 693 aaPredicted RBP5.47□□□□□ -1.53
SMG1-206ENST00000562668 KIF23Q02241 960 aaPredicted RBP5.47□□□□□ -1.53
SMG1-206ENST00000562668 PTPRRQ15256 657 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 HSP90AB4PQ58FF6 505 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 SYDE2Q5VT97 1194 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 TAPT1Q6NXT6 567 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 ZNF788Q6ZQV5 615 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms