RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FMO1Q01740 532 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 CDR2Q01850 454 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 TDGQ13569 410 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 ZNF77Q15935 545 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 VITQ6UXI7 678 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 MFSD6LQ8IWD5 586 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 UBALD2Q8IYN6 164 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 MAB21L3Q8N8X9 362 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 DEPDC1BQ8WUY9 529 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 SYN2Q92777 582 aaPredicted RBP14.12□□□□□ -0.15
CDH1-204ENST00000562118 SPAG5Q96R06 1193 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 PLA2G2FQ9BZM2 168 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 RNF38Q9H0F5 515 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 ZFP14Q9HCL3 533 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 CAPN11Q9UMQ6 739 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 TNFRSF10AO00220 468 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 COCHO43405 550 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 CBFA2T2O43439 604 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 GFPT2O94808 682 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 USP17L7P0C7H9 530 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 SRFP11831 508 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 HNRNPH3P31942 346 aaKnown RBP14.11□□□□□ -0.15
CDH1-204ENST00000562118 SSTR3P32745 418 aaPredicted RBP14.11□□□□□ -0.15
CDH1-204ENST00000562118 USP8P40818 1118 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 GSCP56915 257 aaPredicted RBP14.11□□□□□ -0.15
CDH1-204ENST00000562118 NOMO3P69849 1222 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 ADIGQ0VDE8 80 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 VSTM4Q8IW00 320 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 ARHGAP18Q8N392 663 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 CELF5Q8N6W0 485 aaKnown RBP14.11□□□□□ -0.15
CDH1-204ENST00000562118 SLC20A1Q8WUM9 679 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 RSAD2Q8WXG1 361 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 CPXM1Q96SM3 734 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 ANP32EQ9BTT0 268 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 ULBP1Q9BZM6 244 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 TDP1Q9NUW8 608 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 MUTYHQ9UIF7 546 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 CCL26Q9Y258 94 aa14.11□□□□□ -0.15
CDH1-204ENST00000562118 A0A1W2PQH9 124 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 YJEFN3A6XGL0 299 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 HEPACAM2A8MVW5 462 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 E5RJQ4 531 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 E7ENQ6 273 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 PAPSS1O43252 624 aaPredicted RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 DCXO43602 365 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 GREM1O60565 184 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 TLR5O60602 858 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 TPM3P06753 285 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 MMEP08473 750 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 UNGP13051 313 aaPredicted RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 FERP16591 822 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 PSMC3P17980 439 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 SCNN1AP37088 669 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 AVPR1AP37288 418 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 VIPR2P41587 438 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 ZXDAP98168 799 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 PTPN20Q4JDL3 420 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 HECTD3Q5T447 861 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 HGSNATQ68CP4 663 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 MSANTD2Q6P1R3 559 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 TRIM72Q6ZMU5 477 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 CACNA2D4Q7Z3S7 1137 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 ARL14EPQ8N8R7 260 aaPredicted RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 C1orf131Q8NDD1 294 aaKnown RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 CYP2S1Q96SQ9 504 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 CDK5RAP1Q96SZ6 601 aaKnown RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 NUCKS1Q9H1E3 243 aaKnown RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 ASNSD1Q9NWL6 643 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 CHORDC1Q9UHD1 332 aaPredicted RBP14.1□□□□□ -0.15
CDH1-204ENST00000562118 KIAA1549LQ6ZVL6 1849 aa14.1□□□□□ -0.15
CDH1-204ENST00000562118 FYNP06241 537 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 HDCP19113 662 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 KRT9P35527 623 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 RGS7P49802 495 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
CDH1-204ENST00000562118 YWHAGP61981 247 aaKnown RBP eCLIP14.09□□□□□ -0.15
CDH1-204ENST00000562118 ZBED6P86452 979 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 CENPCQ03188 943 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 PTP4A2Q12974 167 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 TBX2Q13207 712 aaPredicted RBP14.09□□□□□ -0.15
CDH1-204ENST00000562118 EIF4EBP2Q13542 120 aaPredicted RBP14.09□□□□□ -0.15
CDH1-204ENST00000562118 TRIM14Q14142 442 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 SPECC1LQ69YQ0 1117 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 OLFML1Q6UWY5 402 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 SIX6OS1Q8N1H7 587 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 TMEM35BQ8NCS4 154 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 ZNF397Q8NF99 534 aaPredicted RBP14.09□□□□□ -0.15
CDH1-204ENST00000562118 CLEC4CQ8WTT0 213 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 EDAQ92838 391 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 DNASE1L2Q92874 299 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
CDH1-204ENST00000562118 PCDHB18PQ96TA0 734 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 KXD1Q9BQD3 176 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 FAM83CQ9BQN1 747 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 KLF16Q9BXK1 252 aaPredicted RBP14.09□□□□□ -0.15
CDH1-204ENST00000562118 SLITRK6Q9H5Y7 841 aa14.09□□□□□ -0.15
CDH1-204ENST00000562118 TJP2Q9UDY2 1190 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms