RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CYLDQ9NQC7 956 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 FAM49BQ9NUQ9 324 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ARGLU1Q9NWB6 273 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 ATP11BQ9Y2G3 1177 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 COMMD10Q9Y6G5 202 aa6.87□□□□□ -1.31
CAPN3-210ENST00000561817 TDRD15B5MCY1 1934 aaKnown RBP6.87□□□□□ -1.31
CAPN3-210ENST00000561817 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 CASTOR2A6NHX0 329 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 GOLGA8SH3BPF8 625 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 M0QZQ0 153 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 LZTS3O60299 673 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 GPR37L1O60883 481 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 HUS1O60921 280 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PHF2O75151 1096 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 LRCH4O75427 683 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 HEXIM1O94992 359 aaKnown RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 KRT3P12035 628 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SELPP16109 830 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PTPN1P18031 435 aaKnown RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SCNN1AP37088 669 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PLA2G4AP47712 749 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 CARSP49589 748 aaKnown RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 RGS7P49802 495 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 ARSEP51690 589 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 ZNF143P52747 638 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 ADCY2Q08462 1091 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 BST2Q10589 180 aaKnown RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 GRIK3Q13003 919 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 TUSC3Q13454 348 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 BIRC2Q13490 618 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 TAF5Q15542 800 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PPP2R5EQ16537 467 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 ATP13A4Q4VNC1 1196 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 RAB6CQ53S08 254 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PLEKHG4Q58EX7 1191 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 DUPD1Q68J44 220 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SLC24A5Q71RS6 500 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 LRRC8DQ7L1W4 858 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 ARCQ7LC44 396 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 POLNQ7Z5Q5 900 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 C11orf96Q7Z7L8 435 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 KLHL7Q8IXQ5 586 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 GSPT2Q8IYD1 628 aaKnown RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 C7orf61Q8IZ16 206 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 TMEM86AQ8N2M4 240 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 EMC1Q8N766 993 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 B3GALNT2Q8NCR0 500 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SPATA18Q8TC71 538 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SLCO2A1Q92959 643 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SLITRK1Q96PX8 696 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 NAP1L3Q99457 506 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 HINFPQ9BQA5 517 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 B3GNT5Q9BYG0 378 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 RAB6CQ9H0N0 254 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 SNX25Q9H3E2 840 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 LRRC19Q9H756 370 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 METTL5Q9NRN9 209 aaKnown RBP6.86□□□□□ -1.31
CAPN3-210ENST00000561817 TMEM30AQ9NV96 361 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 PCYOX1Q9UHG3 505 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 AMACRQ9UHK6 382 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 NOD1Q9Y239 953 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 NEU2Q9Y3R4 380 aa6.86□□□□□ -1.31
CAPN3-210ENST00000561817 COL4A6Q14031 1691 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 TTC3P53804 2025 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 HHLA1C9JL84 531 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 F8W810 466 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 TMEM189-UBE2V1I3L0A0 370 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 CLDN5O00501 218 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 ENPP3O14638 875 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 XPO1O14980 1071 aaKnown RBP6.85□□□□□ -1.31
CAPN3-210ENST00000561817 TTI1O43156 1089 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 PQBP1O60828 265 aaKnown RBP6.85□□□□□ -1.31
CAPN3-210ENST00000561817 BEST1O76090 585 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 DDHD2O94830 711 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 ENDOD1O94919 500 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 POMCP01189 267 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 CXCL10P02778 98 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 ITGB1P05556 798 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 RALAP11233 206 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 COL6A1P12109 1028 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 ACAT1P24752 427 aaKnown RBP6.85□□□□□ -1.31
CAPN3-210ENST00000561817 MCM3P25205 808 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 PSMA2P25787 234 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 CHRNA3P32297 505 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 PCK1P35558 622 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 FLT3P36888 993 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 COILP38432 576 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-210ENST00000561817 CDKN2BP42772 138 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 FNTAP49354 379 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 BCAT1P54687 386 aa6.85□□□□□ -1.31
CAPN3-210ENST00000561817 DRG2P55039 364 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms