RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 ZNF658Q5TYW1 1059 aaPredicted RBP26.78■■□□□ 1.88
NME3-202ENST00000561637 ANKRD40Q6AI12 368 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 TCEAL6Q6IPX3 200 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 TCEAL3Q969E4 200 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 WBP2Q969T9 261 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 P2RY13Q9BPV8 354 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 NIF3L1Q9GZT8 377 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 CCSER2Q9H7U1 834 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 IL37Q9NZH6 218 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 CFAP97Q9P2B7 532 aa26.78■■□□□ 1.88
NME3-202ENST00000561637 C1QTNF9BB2RNN3 333 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 COCHO43405 550 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 RNF40O75150 1001 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 GADD45BO75293 160 aaPredicted RBP26.77■■□□□ 1.88
NME3-202ENST00000561637 C1QTNF9P0C862 333 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 MBL2P11226 248 aaPredicted RBP26.77■■□□□ 1.88
NME3-202ENST00000561637 GRSF1Q12849 480 aaKnown RBP eCLIP26.77■■□□□ 1.88
NME3-202ENST00000561637 FILIP1Q7Z7B0 1213 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 UNC93AQ86WB7 457 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 SPATA20Q8TB22 786 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 ATP2A3Q93084 1043 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 ZFRQ96KR1 1074 aaKnown RBP26.77■■□□□ 1.88
NME3-202ENST00000561637 ARID3AQ99856 593 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 EHD2Q9NZN4 543 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 ATRXP46100 2492 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 MYOFQ9NZM1 2061 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 NUP205Q92621 2012 aa26.77■■□□□ 1.88
NME3-202ENST00000561637 RTN3O95197 1032 aaPredicted RBP26.76■■□□□ 1.87
NME3-202ENST00000561637 CCDC192P0DO97 292 aa26.76■■□□□ 1.87
NME3-202ENST00000561637 HOXB3P14651 431 aaPredicted RBP26.76■■□□□ 1.87
NME3-202ENST00000561637 CD44P16070 742 aaKnown RBP26.76■■□□□ 1.87
NME3-202ENST00000561637 MPLP40238 635 aa26.76■■□□□ 1.87
NME3-202ENST00000561637 MCCD1P59942 119 aaPredicted RBP26.76■■□□□ 1.87
NME3-202ENST00000561637 PSAPL1Q6NUJ1 521 aa26.76■■□□□ 1.87
NME3-202ENST00000561637 SMARCE1Q969G3 411 aa26.76■■□□□ 1.87
NME3-202ENST00000561637 RMND1Q9NWS8 449 aa26.76■■□□□ 1.87
NME3-202ENST00000561637 MYO16Q9Y6X6 1858 aa26.76■■□□□ 1.87
NME3-202ENST00000561637 CCDC163A0A0D9SF12 145 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 HHLA1C9JL84 531 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CETN3O15182 167 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CILPO75339 1184 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CYP17A1P05093 508 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 EPB41P11171 864 aaKnown RBP26.75■■□□□ 1.87
NME3-202ENST00000561637 PPP3CCP48454 512 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 MXI1P50539 228 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 MESP2Q0VG99 397 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 COL9A2Q14055 689 aaPredicted RBP26.75■■□□□ 1.87
NME3-202ENST00000561637 CBWD6Q4V339 395 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 ZNF394Q53GI3 561 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CBWD3Q5JTY5 395 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CBWD5Q5RIA9 395 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 KRT39Q6A163 491 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CLEC20AQ6ZU45 233 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 SFTPA1Q8IWL2 248 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 ZC3H3Q8IXZ2 948 aaKnown RBP26.75■■□□□ 1.87
NME3-202ENST00000561637 TATDN2Q93075 761 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 GSDMAQ96QA5 445 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 IMPG2Q9BZV3 1241 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 CSNK1G1Q9HCP0 422 aa26.75■■□□□ 1.87
NME3-202ENST00000561637 GIPC1O14908 333 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 ZDHHC11BP0C7U3 371 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 PFKLP17858 780 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 OPRD1P41143 372 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 PDE6CP51160 858 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 ENPEPQ07075 957 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 RNF43Q68DV7 783 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 CD101Q93033 1021 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 CCDC34Q96HJ3 373 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 ZC3H10Q96K80 434 aaKnown RBP26.74■■□□□ 1.87
NME3-202ENST00000561637 HNRNPABQ99729 332 aaKnown RBP26.74■■□□□ 1.87
NME3-202ENST00000561637 NT5C1AQ9BXI3 368 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 CYP3A43Q9HB55 503 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 MAN1B1Q9UKM7 699 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 PCDHGA5Q9Y5G8 931 aa26.74■■□□□ 1.87
NME3-202ENST00000561637 FAM92AA1XBS5 289 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 SMC2O95347 1197 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 FAM200BP0CF97 657 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 GTF2H1P32780 548 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 COBLL1Q53SF7 1204 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 DCAF17Q5H9S7 520 aaPredicted RBP26.73■■□□□ 1.87
NME3-202ENST00000561637 PDZD8Q8NEN9 1154 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 CYFIP2Q96F07 1278 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 OSER1Q9NX31 292 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 ZMIZ1Q9ULJ6 1067 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 SLC8A2Q9UPR5 921 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 KIAA1549LQ6ZVL6 1849 aa26.73■■□□□ 1.87
NME3-202ENST00000561637 ABCA7Q8IZY2 2146 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 WDFY3Q8IZQ1 3526 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 CYP26A1O43174 497 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 NFATC1O95644 943 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 TBX18O95935 607 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 BMP6P22004 513 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 PLK5Q496M5 336 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 HECTD3Q5T447 861 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 TCERG1LQ5VWI1 586 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 C12orf40Q86WS4 652 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 OVCA2Q8WZ82 227 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 TIGD1Q96MW7 591 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 VPS45Q9NRW7 570 aa26.72■■□□□ 1.87
NME3-202ENST00000561637 IRF1P10914 325 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms