RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PCDHGB2Q9Y5G2 931 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 GLI3P10071 1580 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 PLEKHH1Q9ULM0 1364 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 GCC2Q8IWJ2 1684 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 A0A087X1B8 175 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 GRID2IPA4D2P6 1211 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 AQP7P3A6NL99 342 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 CLCA1A8K7I4 914 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 E9PLN8 166 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 AREL1O15033 823 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 SKAP2O75563 359 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 ZFPL1O95159 310 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 PEX11BO96011 259 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 TPH1P17752 444 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 DDX6P26196 483 aaKnown RBP eCLIP4.39□□□□□ -1.71
HERC1-215ENST00000561436 EEF1GP26641 437 aaKnown RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 GCLCP48506 637 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 TRAPPC10P48553 1259 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 HSPA7P48741 367 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 PXNP49023 591 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 ANXA11P50995 505 aaKnown RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 TGFB2P61812 414 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 BLMHQ13867 455 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 HSP90AB4PQ58FF6 505 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 B3GNTL1Q67FW5 361 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 SFRP4Q6FHJ7 346 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 USP17L6PQ6QN14 398 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 CATSPERGQ6ZRH7 1159 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 GAS2L3Q86XJ1 694 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 COLGALT2Q8IYK4 626 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 RNF152Q8N8N0 203 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 ZNF527Q8NB42 609 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 NSUN7Q8NE18 718 aaKnown RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 OR56A3Q8NH54 315 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 RAPGEF4Q8WZA2 1011 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 CCT6BQ92526 530 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 MYEOVQ96EZ4 313 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 VKORC1Q9BQB6 163 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 HERPUD2Q9BSE4 406 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 CHST8Q9H2A9 424 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 DHX36Q9H2U1 1008 aaKnown RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 SERHL2Q9H4I8 314 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 PPCSQ9HAB8 311 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 HEYLQ9NQ87 328 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 TM7SF3Q9NS93 570 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 TBC1D23Q9NUY8 699 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 ETAA1Q9NY74 926 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 FNIP2Q9P278 1114 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 HSFX1Q9UBD0 423 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 AGAP1Q9UPQ3 857 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 DLC1Q96QB1 1528 aa4.39□□□□□ -1.71
HERC1-215ENST00000561436 POLR3AO14802 1390 aaPredicted RBP4.39□□□□□ -1.71
HERC1-215ENST00000561436 ATP7BP35670 1465 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 MYADML2A6NDP7 307 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 TMEM200CA6NKL6 621 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 FOXN1O15353 648 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 FFAR2O15552 330 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 TRIAP1O43715 76 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 RAMP2O60895 175 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 GCP02774 474 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 CHRM3P20309 590 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 FDXRP22570 491 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 ZEB1P37275 1124 aaPredicted RBP4.38□□□□□ -1.71
HERC1-215ENST00000561436 RPS7P62081 194 aaKnown RBP4.38□□□□□ -1.71
HERC1-215ENST00000561436 FPGSQ05932 587 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 DPTQ07507 201 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 TRIM14Q14142 442 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 ARHGEF7Q14155 803 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 PTPAQ15257 358 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 SLC35G1Q2M3R5 365 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 PLA1AQ53H76 456 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 LY6G5CQ5SRR4 150 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 MZT2AQ6P582 158 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 SLC30A10Q6XR72 485 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 MRGPRGQ86SM5 289 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 ANKRD42Q8N9B4 389 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 SNX19Q92543 992 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 MUL1Q969V5 352 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 LRRC46Q96FV0 321 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 NELL2Q99435 816 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 FAM83DQ9H4H8 585 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 PTPRHQ9HD43 1115 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 MID2Q9UJV3 735 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 CDC23Q9UJX2 597 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 ADGRB2O60241 1585 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 E9PCH4 1651 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 KIAA0232Q92628 1395 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 SSH2Q76I76 1423 aa4.38□□□□□ -1.71
HERC1-215ENST00000561436 USP32Q8NFA0 1604 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 A0A087WV62 115 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 PRAMEF33A0A0G2JMD5 474 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 A0A1W2PS29 197 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 TMEM233B4DJY2 109 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 RAB27BO00194 218 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 PODXLO00592 558 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 SUV39H1O43463 412 aa4.37□□□□□ -1.71
HERC1-215ENST00000561436 RGS10O43665 173 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms