RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SLC35F5Q8WV83 523 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM169Q96HH4 297 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 FUBP3Q96I24 572 aaKnown RBP eCLIP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CEP295NLQ96MC4 621 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 PCDHB18PQ96TA0 734 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 AGPAT1Q99943 283 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SYT15Q9BQS2 421 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CLSTN3Q9BQT9 956 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 C17orf80Q9BSJ5 609 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 C11orf84Q9BUA3 381 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 B3GNT5Q9BYG0 378 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF518BQ9C0D4 1074 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 LMAN2LQ9H0V9 348 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ISCUQ9H1K1 167 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SNX25Q9H3E2 840 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 KCNF1Q9H3M0 494 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 DPEP3Q9H4B8 488 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 HAUS4Q9H6D7 363 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CSNK1G1Q9HCP0 422 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 NGRNQ9NPE2 291 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ACP6Q9NPH0 428 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 KCND1Q9NSA2 647 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ZNHIT6Q9NWK9 470 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 DDX43Q9NXZ2 648 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 IL37Q9NZH6 218 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 PUF60Q9UHX1 559 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 MSRAQ9UJ68 235 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SSX2IPQ9Y2D8 614 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SZT2Q5T011 3432 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 MYO7AQ13402 2215 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 EIF3CLB5ME19 914 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF263O14978 683 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 GRM6O15303 877 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ARHGAP6O43182 974 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ADAM12O43184 909 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 LPXNO60711 386 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ATP2C2O75185 946 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PLEKP08567 350 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PDGFRBP09619 1106 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SETSIPP0DME0 302 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SKILP12757 684 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 KRT5P13647 590 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 GNA15P30679 374 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 CTNNB1P35222 781 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 EIF4A3P38919 411 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 GABRB2P47870 512 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 GLUD2P49448 558 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 GSCP56915 257 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ERVFC1P60507 584 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 NOMO3P69849 1222 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PTP4A2Q12974 167 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 KCNC3Q14003 757 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SLC18A3Q16572 532 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 NFE2Q16621 373 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SGO2Q562F6 1265 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SPOUT1Q5T280 376 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 TPGS2Q68CL5 300 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF280DQ6N043 979 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PPP1R2P3Q6NXS1 205 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 VSTM1Q6UX27 236 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 RAD9BQ6WBX8 426 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM110Q86TL2 294 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ACOT1Q86TX2 421 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 TTC30AQ86WT1 665 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PALB2Q86YC2 1186 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PHF13Q86YI8 300 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 DCP1BQ8IZD4 617 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SCML4Q8N228 414 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 C12orf29Q8N999 325 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ZMIZ2Q8NF64 920 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF461Q8TAF7 563 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 SLC20A1Q8WUM9 679 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 CYFIP2Q96F07 1278 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PCED1BQ96HM7 432 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 VCPIP1Q96JH7 1222 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 HSFY1Q96LI6 401 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 HEXIM2Q96MH2 286 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 EIF3CQ99613 913 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 BAG1Q99933 345 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 DUSP16Q9BY84 665 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 DNAI2Q9GZS0 605 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 NHEJ1Q9H9Q4 299 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PNPLA8Q9NP80 782 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM30AQ9NV96 361 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 TMLHEQ9NVH6 421 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 LMCD1Q9NZU5 365 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 MARK1Q9P0L2 795 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 AFF4Q9UHB7 1163 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 NAGPAQ9UK23 515 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 INTUQ9ULD6 942 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 REXO2Q9Y3B8 237 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 PCDHB11Q9Y5F2 797 aa5.79□□□□□ -1.48
ZEB1-220ENST00000560909 EPN1Q9Y6I3 576 aaPredicted RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 TDRD15B5MCY1 1934 aaKnown RBP5.79□□□□□ -1.48
ZEB1-220ENST00000560909 A0A087X0T9 212 aa5.78□□□□□ -1.48
ZEB1-220ENST00000560909 TCRBV5S1A1TA0A578 114 aa5.78□□□□□ -1.48
ZEB1-220ENST00000560909 FAM92AA1XBS5 289 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms