RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM124BQ9H5Z6 455 aaPredicted RBP10.56□□□□□ -0.72
TPM1-225ENST00000560679 MAGEC2Q9UBF1 373 aaPredicted RBP10.56□□□□□ -0.72
TPM1-225ENST00000560679 SUSD2Q9UGT4 822 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 CDH9Q9ULB4 789 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 STARD13Q9Y3M8 1113 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
TPM1-225ENST00000560679 GOLGA4Q13439 2230 aaKnown RBP10.56□□□□□ -0.72
TPM1-225ENST00000560679 MGAQ8IWI9 3026 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 FAM149AA5PLN7 773 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 TRABD2BA6NFA1 517 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 TRIM66O15016 1216 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 COCHO43405 550 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 CILPO75339 1184 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 TBCAO75347 108 aaKnown RBP10.55□□□□□ -0.72
TPM1-225ENST00000560679 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
TPM1-225ENST00000560679 ABL1P00519 1130 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 KRT19P08727 400 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 ZNF883P0CG24 379 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 PLA2G2AP14555 144 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 DDIT3P35638 169 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 PPP3CCP48454 512 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 HMGN5P82970 282 aaKnown RBP10.55□□□□□ -0.72
TPM1-225ENST00000560679 CYP27A1Q02318 531 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 C19orf57Q0VDD7 668 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 SFR1Q86XK3 245 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 DDX42Q86XP3 938 aaKnown RBP eCLIP10.55□□□□□ -0.72
TPM1-225ENST00000560679 CSGALNACT2Q8N6G5 542 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 SETD7Q8WTS6 366 aaKnown RBP10.55□□□□□ -0.72
TPM1-225ENST00000560679 RAD54LQ92698 747 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 FOXJ1Q92949 421 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 OTUB2Q96DC9 234 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
TPM1-225ENST00000560679 RBAKQ9NYW8 714 aaPredicted RBP10.55□□□□□ -0.72
TPM1-225ENST00000560679 TBC1D14Q9P2M4 693 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 DEC1Q9P2X7 70 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 BTBD3Q9Y2F9 522 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 TMEM131Q92545 1883 aa10.55□□□□□ -0.72
TPM1-225ENST00000560679 MYO18BQ8IUG5 2567 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 A0A1B0GTW7 788 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 PRRT4C9JH25 899 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 GREM1O60565 184 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 GNSP15586 552 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 ANXA13P27216 316 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 ABCD1P33897 745 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 ABCG1P45844 678 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 GRIN1Q05586 938 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 IFRD2Q12894 506 aaPredicted RBP10.54□□□□□ -0.72
TPM1-225ENST00000560679 MDH1BQ5I0G3 518 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 WDR45BQ5MNZ6 344 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 SYCP2LQ5T4T6 812 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 DBX2Q6ZNG2 339 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 ZNF720Q7Z2F6 126 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 CHPFQ8IZ52 775 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 FAM184AQ8NB25 1140 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 OR5B17Q8NGF7 314 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 PIP4K2CQ8TBX8 421 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 MYCBPAPQ8TBZ2 947 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 HVCN1Q96D96 273 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 P2RY11Q96G91 374 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 C8orf48Q96LL4 319 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 ZNF518BQ9C0D4 1074 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 GAREM1Q9H706 876 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 PRDM16Q9HAZ2 1276 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 PDE11AQ9HCR9 933 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 SPHK2Q9NRA0 654 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 TM7SF3Q9NS93 570 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 DNAJC17Q9NVM6 304 aaKnown RBP10.54□□□□□ -0.72
TPM1-225ENST00000560679 LIMCH1Q9UPQ0 1083 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 NFE2L3Q9Y4A8 694 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 SLCO1B1Q9Y6L6 691 aa10.54□□□□□ -0.72
TPM1-225ENST00000560679 HECTD1Q9ULT8 2610 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 GOLGA8IPA6NC78 632 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 GOLGA8JA6NMD2 632 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 GOLGA8CPA6NN73 597 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 MEI4A8MW99 385 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 KCNJ18B7U540 433 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 WASH3PC4AMC7 463 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 SLC26A4O43511 780 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 CACNG3O60359 315 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 NDUFS2O75306 463 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 CER1O95813 267 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 KRT18P05783 430 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 NCAM1P13591 858 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 WARSP23381 471 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 ITPKBP27987 946 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 CD6P30203 668 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 DEKP35659 375 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 CASP5P51878 434 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 RBP5P82980 135 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 POSTNQ15063 836 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 MAPRE1Q15691 268 aaKnown RBP10.53□□□□□ -0.72
TPM1-225ENST00000560679 ANO4Q32M45 955 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 RILPL1Q5EBL4 403 aa10.53□□□□□ -0.72
TPM1-225ENST00000560679 TDRD10Q5VZ19 366 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms