RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 APOA5Q6Q788 366 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 FAM43AQ8N2R8 423 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 FAM184AQ8NB25 1140 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 OR52N2Q8NGI0 321 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 SLC35G2Q8TBE7 412 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 GRAPLQ8TC17 118 aaPredicted RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 SNX33Q8WV41 574 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 NRG4Q8WWG1 115 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 PHKBQ93100 1093 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 HPS3Q969F9 1004 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 TTC17Q96AE7 1141 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 NSUN4Q96CB9 384 aaKnown RBP4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CLIP3Q96DZ5 547 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CEP95Q96GE4 821 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 PDLIM2Q96JY6 352 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 NAPBQ9H115 298 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 MAN1C1Q9NR34 630 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 CLIC4Q9Y696 253 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 SCN7AQ01118 1682 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 ELP1O95163 1332 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 ZMYM6O95789 1325 aa4.91□□□□□ -1.62
TMOD3-207ENST00000560549 A0A0C4DFX4 3053 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 TAF1P21675 1872 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 TNRC6CQ9HCJ0 1690 aaKnown RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 IFIT3O14879 490 aaKnown RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 ITGA10O75578 1167 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 SERPINB2P05120 415 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 MYBP10242 640 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 KRT4P19013 534 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 GNAT2P19087 354 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 XPAP23025 273 aaPredicted RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 AKAP5P24588 427 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 PRDX5P30044 214 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 TDO2P48775 406 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 PPM1FP49593 454 aaPredicted RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 GZMKP49863 264 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 METAP2P50579 478 aaKnown RBP eCLIP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 WNT3AP56704 352 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 NRG3P56975 720 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 CCDC173Q0VFZ6 552 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 CAMK4Q16566 473 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 UAP1L1Q3KQV9 507 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 CAVIN4Q5BKX8 364 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 BTNL9Q6UXG8 535 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 MFSD6Q6ZSS7 791 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 GPRIN1Q7Z2K8 1008 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 SYT12Q8IV01 421 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 FBXO18Q8NFZ0 1043 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 TDRD7Q8NHU6 1098 aaKnown RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 DPF2Q92785 391 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 ANKRD2Q9GZV1 360 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 CLSTN2Q9H4D0 955 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 ZSCAN16Q9H4T2 348 aaPredicted RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.62
TMOD3-207ENST00000560549 DACT1Q9NYF0 836 aa4.9□□□□□ -1.62
TMOD3-207ENST00000560549 LAMB2P55268 1798 aa4.9□□□□□ -1.63
TMOD3-207ENST00000560549 LAMA4Q16363 1823 aa4.9□□□□□ -1.63
TMOD3-207ENST00000560549 MYH3P11055 1940 aa4.9□□□□□ -1.63
TMOD3-207ENST00000560549 A0A087WWV3 80 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 CCDC154A6NI56 674 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 POLRMTO00411 1230 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 ZBTB43O43298 467 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 AP1G1O43747 822 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 MFAP3LO75121 409 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 PRDM1O75626 825 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 IPO13O94829 963 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 MMP10P09238 476 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 LIFRP42702 1097 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 SLC6A9P48067 706 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 TGFB2P61812 414 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 POU5F1Q01860 360 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 TRDNQ13061 729 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 CRY2Q49AN0 593 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 DCAF17Q5H9S7 520 aaPredicted RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 RABL3Q5HYI8 236 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 IFIT1BQ5T764 474 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 PCSK4Q6UW60 755 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 OLFM4Q6UX06 510 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 RBM43Q6ZSC3 357 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 Q6ZVL8 140 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 CHST15Q7LFX5 561 aaPredicted RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 MICU3Q86XE3 530 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 GSPT2Q8IYD1 628 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 NKAPQ8N5F7 415 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 CNBD1Q8NA66 436 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 C1orf131Q8NDD1 294 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 REPS2Q8NFH8 660 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 ENGASEQ8NFI3 743 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 MDM1Q8TC05 714 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF483Q8TF39 744 aaPredicted RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 DIS3LQ8TF46 1054 aaKnown RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 SYAP1Q96A49 352 aaPredicted RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 C8orf76Q96K31 380 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 CPPED1Q9BRF8 314 aaPredicted RBP4.89□□□□□ -1.63
TMOD3-207ENST00000560549 SELENOOQ9BVL4 669 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 BRIP1Q9BX63 1249 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 NACAP1Q9BZK3 213 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 KRT23Q9C075 422 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 NMRK2Q9NPI5 230 aa4.89□□□□□ -1.63
TMOD3-207ENST00000560549 NLRC4Q9NPP4 1024 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms