RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CTTNQ14247 550 aaKnown RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC15A2Q16348 729 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 HLFQ16534 295 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC35G1Q2M3R5 365 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC4A8Q2Y0W8 1093 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 PARP10Q53GL7 1025 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 TAF1BQ53T94 588 aaPredicted RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 HERC4Q5GLZ8 1057 aaPredicted RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 C12orf60Q5U649 245 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF449Q6P9G9 518 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 BORAQ6PGQ7 559 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 KCNK18Q7Z418 384 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 ANKS1BQ7Z6G8 1248 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF554Q86TJ5 538 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SPATA24Q86W54 205 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 GPBP1Q86WP2 473 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 CHSY1Q86X52 802 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 MYLK4Q86YV6 388 aaPredicted RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SRRM1Q8IYB3 904 aaKnown RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 CCDC89Q8N998 374 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC17A8Q8NDX2 589 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 CCDC110Q8TBZ0 833 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 DIS3LQ8TF46 1054 aaKnown RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 JADE3Q92613 823 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 TEKT1Q969V4 418 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SKA1Q96BD8 255 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 NSUN4Q96CB9 384 aaKnown RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 ARHGEF26Q96DR7 871 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 WDR89Q96FK6 387 aaPredicted RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 BTBD9Q96Q07 612 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 CRAMP1Q96RY5 1269 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC9A7Q96T83 725 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 MIPEPQ99797 713 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 AGPAT1Q99943 283 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 C1orf21Q9H246 121 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 VPS11Q9H270 941 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 RIOX1Q9H6W3 641 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 DNAJC18Q9H819 358 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 PREBQ9HCU5 417 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 OLFML3Q9NRN5 406 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 RAD18Q9NS91 495 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 KRT82Q9NSB4 513 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 NDE1Q9NXR1 346 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 THEGQ9P2T0 379 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 DDX25Q9UHL0 483 aaKnown RBP6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 NR2E3Q9Y5X4 410 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 FOCADQ5VW36 1801 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 ABCA3Q99758 1704 aa6.24□□□□□ -1.41
SNRPA1-209ENST00000560307 DOT1LQ8TEK3 1739 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CYP2D7A0A087X1C5 515 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 IQCA1LA6NCM1 817 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 TMEM221A6NGB7 291 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ANKRD63C9JTQ0 380 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 KLRF2D3W0D1 207 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 AGRPO00253 132 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 KLF11O14901 512 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 TBX3O15119 743 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 PMM2O15305 246 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 TP73O15350 636 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 TYROBPO43914 113 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ZNF862O60290 1169 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 FAM155BO75949 473 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 PARNO95453 639 aaKnown RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CBX6O95503 412 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ACSL3O95573 720 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 NR3C1P04150 777 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CYP1A2P05177 515 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CTSBP07858 339 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 RARBP10826 455 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ANPEPP15144 967 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ALDH1B1P30837 517 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 IL6STP40189 918 aaPredicted RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC1A1P43005 524 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ITGA8P53708 1063 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC12A3P55017 1021 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 TFAP4Q01664 338 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 DNAJC3Q13217 504 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CYLC2Q14093 348 aaPredicted RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 DRAP1Q14919 205 aaPredicted RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 DLGAP5Q15398 846 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 SLC10A6Q3KNW5 377 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 SV2CQ496J9 727 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 Q4G0T1 1027 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 ASPRV1Q53RT3 343 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 SGO2Q562F6 1265 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 CAVIN4Q5BKX8 364 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 DALRD3Q5D0E6 543 aaKnown RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 FAM47AQ5JRC9 791 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 UBAP2Q5T6F2 1119 aaKnown RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 SPTY2D1Q68D10 685 aaPredicted RBP6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 DSTYKQ6XUX3 929 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 B3GNT6Q6ZMB0 384 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 FAM47EQ6ZV65 393 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 TOM1L2Q6ZVM7 507 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 STXBP4Q6ZWJ1 553 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 MAEAQ7L5Y9 396 aa6.23□□□□□ -1.41
SNRPA1-209ENST00000560307 OTUD6AQ7L8S5 288 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms