RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PCDHB13Q9Y5F0 798 aa21.03■□□□□ 0.96
RABGGTA-214ENST00000560163 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
RABGGTA-214ENST00000560163 PTPRBP23467 1997 aa21.03■□□□□ 0.96
RABGGTA-214ENST00000560163 GCNT3O95395 438 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 WASP42768 502 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 PLEKHG6Q3KR16 790 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 PREPLQ4J6C6 727 aaPredicted RBP21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 C10orf76Q5T2E6 689 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 BTBD8Q5XKL5 378 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 BBS7Q8IWZ6 715 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 IPO4Q8TEX9 1081 aaKnown RBP21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 OVCA2Q8WZ82 227 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 WBP2Q969T9 261 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 ACOX2Q99424 681 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 FAM124BQ9H5Z6 455 aaPredicted RBP21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 CYP8B1Q9UNU6 501 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 PCDHB9Q9Y5E1 797 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 APC2O95996 2303 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 ACACAQ13085 2346 aa21.02■□□□□ 0.96
RABGGTA-214ENST00000560163 ASH1LQ9NR48 2969 aaKnown RBP21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 TACC1O75410 805 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 BMP15O95972 392 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 FAM163BP0C2L3 166 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 GNL1P36915 607 aaPredicted RBP21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 DUOXA2Q1HG44 320 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 EGFLAMQ63HQ2 1017 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 HS2ST1Q7LGA3 356 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 GPD1LQ8N335 351 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 MDM1Q8TC05 714 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 MMS19Q96T76 1030 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 GABRG3Q99928 467 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 ZNF518BQ9C0D4 1074 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 CD93Q9NPY3 652 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 IL37Q9NZH6 218 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 KIAA1522Q9P206 1035 aaPredicted RBP21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 STK17AQ9UEE5 414 aa21.01■□□□□ 0.95
RABGGTA-214ENST00000560163 FRMD3A2A2Y4 597 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 KALRNO60229 2985 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 CST3P01034 146 aaPredicted RBP21■□□□□ 0.95
RABGGTA-214ENST00000560163 PTPN1P18031 435 aaKnown RBP21■□□□□ 0.95
RABGGTA-214ENST00000560163 YWHAQP27348 245 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 TOGARAM2Q6ZUX3 1019 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 NUDT18Q6ZVK8 323 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 SYCP3Q8IZU3 236 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 NUP93Q8N1F7 819 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 PDZD8Q8NEN9 1154 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 B3GNT5Q9BYG0 378 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 ELOVL4Q9GZR5 314 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 DPEP3Q9H4B8 488 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 SCUBE2Q9NQ36 999 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 SUSD2Q9UGT4 822 aa21■□□□□ 0.95
RABGGTA-214ENST00000560163 CHORDC1Q9UHD1 332 aaPredicted RBP21■□□□□ 0.95
RABGGTA-214ENST00000560163 R3HCC1Q9Y3T6 440 aaKnown RBP21■□□□□ 0.95
RABGGTA-214ENST00000560163 H3BQV1 296 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 GREM1O60565 184 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 TNNC2P02585 160 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 ZDHHC11BP0C7U3 371 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 GJB2P29033 226 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 GRIK2Q13002 908 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 ALCAMQ13740 583 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 SF3A1Q15459 793 aaKnown RBP20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 HECTD3Q5T447 861 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 NOC3LQ8WTT2 800 aaKnown RBP20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 HNRNPLLQ8WVV9 542 aaKnown RBP20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 MRGPRX1Q96LB2 322 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 ZDHHC5Q9C0B5 715 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 CCSER2Q9H7U1 834 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 DKK4Q9UBT3 224 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 PCOLCE2Q9UKZ9 415 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 APOBEC2Q9Y235 224 aaKnown RBP20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 RAXQ9Y2V3 346 aa20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 FLNBO75369 2602 aaKnown RBP20.99■□□□□ 0.95
RABGGTA-214ENST00000560163 PRRT4C9JH25 899 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 CLDN5O00501 218 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 KIAA0391O15091 583 aaKnown RBP20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 DKK1O94907 266 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 RTN3O95197 1032 aaPredicted RBP20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 MAOBP27338 520 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 TUBP50607 506 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 IFRD2Q12894 506 aaPredicted RBP20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 SURF1Q15526 300 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 ANO4Q32M45 955 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 SYCP2LQ5T4T6 812 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 TRAPPC11Q7Z392 1133 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 CBWD2Q8IUF1 395 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 CHPFQ8IZ52 775 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 RGL4Q8IZJ4 473 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 SCAMP5Q8TAC9 235 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 DNASE2BQ8WZ79 361 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 FOXJ1Q92949 421 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 FBXO32Q969P5 355 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 KCNK16Q96T55 309 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 SLC6A17Q9H1V8 727 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 SNX25Q9H3E2 840 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 SH3BP1Q9Y3L3 701 aa20.98■□□□□ 0.95
RABGGTA-214ENST00000560163 FAM92AA1XBS5 289 aa20.97■□□□□ 0.95
RABGGTA-214ENST00000560163 ZNF233A6NK53 670 aa20.97■□□□□ 0.95
RABGGTA-214ENST00000560163 CACNG3O60359 315 aa20.97■□□□□ 0.95
RABGGTA-214ENST00000560163 PRPF6O94906 941 aaKnown RBP20.97■□□□□ 0.95
RABGGTA-214ENST00000560163 GNSP15586 552 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms