RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 SHC3Q92529 594 aa9□□□□□ -0.97
USP3-217ENST00000560070 WBP2Q969T9 261 aa9□□□□□ -0.97
USP3-217ENST00000560070 SPAG5Q96R06 1193 aa9□□□□□ -0.97
USP3-217ENST00000560070 STK33Q9BYT3 514 aa9□□□□□ -0.97
USP3-217ENST00000560070 FOXQ1Q9C009 403 aa9□□□□□ -0.97
USP3-217ENST00000560070 GANQ9H2C0 597 aa9□□□□□ -0.97
USP3-217ENST00000560070 EBF3Q9H4W6 596 aa9□□□□□ -0.97
USP3-217ENST00000560070 RTN4Q9NQC3 1192 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 SLC2A4RGQ9NR83 387 aa9□□□□□ -0.97
USP3-217ENST00000560070 DUS2Q9NX74 493 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 GTSE1Q9NYZ3 720 aa9□□□□□ -0.97
USP3-217ENST00000560070 RAPGEFL1Q9UHV5 662 aa9□□□□□ -0.97
USP3-217ENST00000560070 CYTH4Q9UIA0 394 aa9□□□□□ -0.97
USP3-217ENST00000560070 NDRG2Q9UN36 371 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 SIK3Q9Y2K2 1263 aa9□□□□□ -0.97
USP3-217ENST00000560070 MTF2Q9Y483 593 aaPredicted RBP9□□□□□ -0.97
USP3-217ENST00000560070 USP3Q9Y6I4 520 aa9□□□□□ -0.97
USP3-217ENST00000560070 TCF20Q9UGU0 1960 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 SCN1AP35498 2009 aa9□□□□□ -0.97
USP3-217ENST00000560070 UNC80Q8N2C7 3258 aa9□□□□□ -0.97
USP3-217ENST00000560070 VWA8A3KMH1 1905 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 FAM170BA6NMN3 283 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 E7ENQ6 273 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 CHADO15335 359 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 OAS1P00973 400 aaKnown RBP8.99□□□□□ -0.97
USP3-217ENST00000560070 DCNP07585 359 aaKnown RBP8.99□□□□□ -0.97
USP3-217ENST00000560070 ZDHHC11BP0C7U3 371 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 SETSIPP0DME0 302 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 RALAP11233 206 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 WEE1P30291 646 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 GPD2P43304 727 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 IFNAR2P48551 515 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 FANCCQ00597 558 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 PFKPQ01813 784 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 EFEMP1Q12805 493 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 MTF1Q14872 753 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 STILQ15468 1287 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 MLF2Q15773 248 aaPredicted RBP8.99□□□□□ -0.97
USP3-217ENST00000560070 ARHGAP29Q52LW3 1261 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 RAB41Q5JT25 222 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 BSPRYQ5W0U4 402 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 BTBD8Q5XKL5 378 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 PHLDB2Q86SQ0 1253 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 SUGP1Q8IWZ8 645 aaKnown RBP8.99□□□□□ -0.97
USP3-217ENST00000560070 WDTC1Q8N5D0 677 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 RNF139Q8WU17 664 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 OVCA2Q8WZ82 227 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 IRF7Q92985 503 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 NAA15Q9BXJ9 866 aaKnown RBP8.99□□□□□ -0.97
USP3-217ENST00000560070 TBC1D17Q9HA65 648 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 PNPLA8Q9NP80 782 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 ARHGEF3Q9NR81 526 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP3-217ENST00000560070 OBP2AQ9NY56 170 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 TJP2Q9UDY2 1190 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 RASAL2Q9UJF2 1139 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 SH3BP1Q9Y3L3 701 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 PLXNA3P51805 1871 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 A0A0C4DFX4 3053 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 ATG2AQ2TAZ0 1938 aa8.99□□□□□ -0.97
USP3-217ENST00000560070 CITO14578 2027 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SLC12A8A0AV02 714 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 FAM92AA1XBS5 289 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 OTOL1A6NHN0 477 aaPredicted RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 SOBPA7XYQ1 873 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 PRR33A8MZF0 331 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 MMEP08473 750 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 C7P10643 843 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 CYP11B1P15538 503 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 AVPR2P30518 371 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 STAT1P42224 750 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 PDE6CP51160 858 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 VCPP55072 806 aaKnown RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 UBASH3AP57075 661 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 BPIFB4P59827 614 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SLC7A9P82251 487 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 FCHO2Q0JRZ9 810 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 RUNX3Q13761 415 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 ZNF268Q14587 947 aaPredicted RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 ZNF77Q15935 545 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SNX30Q5VWJ9 437 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 NAIF1Q69YI7 327 aaPredicted RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 PM20D1Q6GTS8 502 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 OR6B2Q6IFH4 312 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 LRSAM1Q6UWE0 723 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 ZNF852Q6ZMS4 543 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 CCDC186Q7Z3E2 898 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 CACNA2D4Q7Z3S7 1137 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 ARHGAP18Q8N392 663 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 FBXL6Q8N531 539 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 C1orf131Q8NDD1 294 aaKnown RBP8.98□□□□□ -0.97
USP3-217ENST00000560070 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 CPLX3Q8WVH0 158 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 CPA5Q8WXQ8 436 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 KCTD13Q8WZ19 329 aa8.98□□□□□ -0.97
USP3-217ENST00000560070 SLC39A7Q92504 469 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms