RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PDGFAP04085 211 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SERPING1P05155 500 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 TPM1P09493 284 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ODC1P11926 461 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 CYP11B1P15538 503 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GLB1P16278 677 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 WARSP23381 471 aaKnown RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 TBXAS1P24557 533 aaPredicted RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 ITGB7P26010 798 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ADORA2BP29275 332 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GNA15P30679 374 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ATICP31939 592 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 RPL9P32969 192 aaKnown RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 CD68P34810 354 aaPredicted RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 CA8P35219 290 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 PNPLA4P41247 253 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GPR15P49685 360 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ARPP19P56211 112 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GSDMDP57764 484 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 FMO1Q01740 532 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 CYP27A1Q02318 531 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GFPT1Q06210 699 aaPredicted RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 INCA1Q0VD86 236 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 MEA1Q16626 185 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GOLGA7BQ2TAP0 167 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 MDH1BQ5I0G3 518 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 FAM171A1Q5VUB5 890 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SDHAF4Q5VUM1 108 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 DCLRE1AQ6PJP8 1040 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 TXNDC11Q6PKC3 985 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 XKR5Q6UX68 686 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 LIMS2Q7Z4I7 341 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 CNGA4Q8IV77 575 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 FIBCD1Q8N539 461 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 TOP6BLQ8N6T0 577 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 C1orf131Q8NDD1 294 aaKnown RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 APPL2Q8NEU8 664 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 OR8K1Q8NGG5 319 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SLC30A5Q8TAD4 765 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 FEZF2Q8TBJ5 459 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GDPD5Q8WTR4 605 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 DDX1Q92499 740 aaKnown RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 TAF4BQ92750 862 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 JAKMIP2Q96AA8 810 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 IGSF21Q96ID5 467 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 UROC1Q96N76 676 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ZNF558Q96NG5 402 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 PGLYRP2Q96PD5 576 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 PANX2Q96RD6 677 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 BAG1Q99933 345 aaPredicted RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 SYT15Q9BQS2 421 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SYT11Q9BT88 431 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
SPG11-220ENST00000559933 NUP58Q9BVL2 599 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 PACSIN1Q9BY11 444 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SNX25Q9H3E2 840 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 CRTAC1Q9NQ79 661 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 TMEM30AQ9NV96 361 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GDAP2Q9NXN4 497 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 DDX43Q9NXZ2 648 aaKnown RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 AIPL1Q9NZN9 384 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 KANSL3Q9P2N6 904 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 TRIM10Q9UDY6 481 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 CYTH4Q9UIA0 394 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 FBXL5Q9UKA1 691 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SZT2Q5T011 3432 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 CUL9Q8IWT3 2517 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 SF3B1O75533 1304 aaKnown RBP eCLIP5.53□□□□□ -1.52
SPG11-220ENST00000559933 REV3LO60673 3130 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 A0A087X0T9 212 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 MYBPHLA2RUH7 354 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 GOLGA6L6A8MZA4 724 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 M0QYV0 167 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 O00370 1275 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 TACC1O75410 805 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 BEST1O76090 585 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 FGF18O76093 207 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 ALX3O95076 343 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 VNN2O95498 520 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 EFEMP2O95967 443 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 ALDH2P05091 517 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 FAM228BP0C875 321 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 P4HA1P13674 534 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 FERP16591 822 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 LAG3P18627 525 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 GNL1P36915 607 aaPredicted RBP5.53□□□□□ -1.52
SPG11-220ENST00000559933 ALDH7A1P49419 539 aaKnown RBP5.53□□□□□ -1.52
SPG11-220ENST00000559933 RGS7P49802 495 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 PDE6CP51160 858 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 KIF11P52732 1056 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 MTMR3Q13615 1198 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 ASTE1Q2TB18 679 aaPredicted RBP5.53□□□□□ -1.52
SPG11-220ENST00000559933 SLC39A12Q504Y0 691 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 NAA35Q5VZE5 725 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 PLPP4Q5VZY2 271 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 PAQR9Q6ZVX9 377 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 LRRTM3Q86VH5 581 aa5.53□□□□□ -1.52
SPG11-220ENST00000559933 TTC30AQ86WT1 665 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms