RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 KBTBD6Q86V97 674 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 PHTF2Q8N3S3 785 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 CCDC33Q8N5R6 958 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 NAT16Q8N8M0 369 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 PDZD8Q8NEN9 1154 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 USP33Q8TEY7 942 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 SMARCE1Q969G3 411 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 DUSP9Q99956 384 aaKnown RBP18.74■□□□□ 0.59
HDDC3-205ENST00000559898 CYP3A43Q9HB55 503 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 USP18Q9UMW8 372 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 SLC8A2Q9UPR5 921 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 INVSQ9Y283 1065 aa18.74■□□□□ 0.59
HDDC3-205ENST00000559898 SPAG17Q6Q759 2223 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 GOLGA6L4A6NEF3 574 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 TULP2O00295 520 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 TLR5O60602 858 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 CALCAP01258 141 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 EPB41P11171 864 aaKnown RBP18.73■□□□□ 0.59
HDDC3-205ENST00000559898 HOXA6P31267 233 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 DMC1Q14565 340 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 COBLL1Q53SF7 1204 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 TCERG1LQ5VWI1 586 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 LAIR1Q6GTX8 287 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 TMEM25Q86YD3 366 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 FBXL13Q8NEE6 735 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 GSDMAQ96QA5 445 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 KLF16Q9BXK1 252 aaPredicted RBP18.73■□□□□ 0.59
HDDC3-205ENST00000559898 IMPG2Q9BZV3 1241 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 SMOC1Q9H4F8 434 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 CISHQ9NSE2 258 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 HCN2Q9UL51 889 aa18.73■□□□□ 0.59
HDDC3-205ENST00000559898 MED19A0JLT2 244 aaPredicted RBP18.72■□□□□ 0.59
HDDC3-205ENST00000559898 AXIN1O15169 862 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 GDF9O60383 454 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 GTF2H1P32780 548 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 AMPD2Q01433 879 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 ENPEPQ07075 957 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 LRMPQ12912 555 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 NR1H3Q13133 447 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 TMEM92Q6UXU6 159 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 CEP68Q76N32 757 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 NDRG1Q92597 394 aaKnown RBP18.72■□□□□ 0.59
HDDC3-205ENST00000559898 SLC35C1Q96A29 364 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 HEXIM2Q96MH2 286 aaKnown RBP18.72■□□□□ 0.59
HDDC3-205ENST00000559898 RMND1Q9NWS8 449 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 COMMD8Q9NX08 183 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 DLL3Q9NYJ7 618 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 GMEB2Q9UKD1 530 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 SCML2Q9UQR0 700 aa18.72■□□□□ 0.59
HDDC3-205ENST00000559898 MYO18AQ92614 2054 aaKnown RBP18.71■□□□□ 0.59
HDDC3-205ENST00000559898 E2F8A0AVK6 867 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 BIN1O00499 593 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 ADH5P11766 374 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 KIF11P52732 1056 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 FBXO43Q4G163 708 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 SYT13Q7L8C5 426 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.71■□□□□ 0.59
HDDC3-205ENST00000559898 TTC30AQ86WT1 665 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 GAB3Q8WWW8 586 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 TIGD1Q96MW7 591 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 DUSP16Q9BY84 665 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 TPSD1Q9BZJ3 242 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 RAB23Q9ULC3 237 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 SH3BP1Q9Y3L3 701 aa18.71■□□□□ 0.59
HDDC3-205ENST00000559898 PPP1R3GB7ZBB8 358 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 ATG13O75143 517 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 RPP40O75818 363 aaKnown RBP18.7■□□□□ 0.58
HDDC3-205ENST00000559898 RETP07949 1114 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 RARGP13631 454 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 TIE1P35590 1138 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 TUBP50607 506 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 KLHL10Q6JEL2 608 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 ETFBKMTQ8IXQ9 262 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 ALLCQ8N6M5 410 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 UBR7Q8N806 425 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 KAT5Q92993 513 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 ERLEC1Q96DZ1 483 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 TMEM176AQ96HP8 235 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 FBXO44Q9H4M3 255 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 TLR8Q9NR97 1041 aaKnown RBP18.7■□□□□ 0.58
HDDC3-205ENST00000559898 RXFP3Q9NSD7 469 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 SEMA4GQ9NTN9 838 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.7■□□□□ 0.58
HDDC3-205ENST00000559898 COQ4Q9Y3A0 265 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 ABCA7Q8IZY2 2146 aa18.7■□□□□ 0.58
HDDC3-205ENST00000559898 SGK1O00141 431 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 SLC16A3O15427 465 aaKnown RBP18.69■□□□□ 0.58
HDDC3-205ENST00000559898 KAT7O95251 611 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 SMC2O95347 1197 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 CNR2P34972 360 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 ATXN1P54253 815 aaKnown RBP18.69■□□□□ 0.58
HDDC3-205ENST00000559898 FKBP3Q00688 224 aaKnown RBP18.69■□□□□ 0.58
HDDC3-205ENST00000559898 SF3A2Q15428 464 aaKnown RBP18.69■□□□□ 0.58
HDDC3-205ENST00000559898 DDX42Q86XP3 938 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDDC3-205ENST00000559898 FRMD1Q8N878 549 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 TXNDC5Q8NBS9 432 aaKnown RBP18.69■□□□□ 0.58
HDDC3-205ENST00000559898 PNKPQ96T60 521 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 TSG101Q99816 390 aa18.69■□□□□ 0.58
HDDC3-205ENST00000559898 ARRDC1-AS1Q9H2J1 176 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms