RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 EHBP1Q8NDI1 1231 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 ATRIPQ8WXE1 791 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 KAT5Q92993 513 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 CD101Q93033 1021 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 CHFRQ96EP1 664 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 HINFPQ9BQA5 517 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 CRACR2AQ9BSW2 395 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 LRRC4Q9HBW1 653 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 LMBRD1Q9NUN5 540 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 IL37Q9NZH6 218 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 TBC1D14Q9P2M4 693 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 RASAL2Q9UJF2 1139 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 LSM7Q9UK45 103 aaKnown RBP8.63□□□□□ -1.03
SNX1-207ENST00000559401 NUDT5Q9UKK9 219 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 SCML2Q9UQR0 700 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 ATG2BQ96BY7 2078 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
SNX1-207ENST00000559401 KIAA1549LQ6ZVL6 1849 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 E2F8A0AVK6 867 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 FAM92AA1XBS5 289 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 PRR23AA6NEV1 266 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 PROB1E7EW31 1015 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 M0QYV0 167 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 TRDMT1O14717 391 aaKnown RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 MDM4O15151 490 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 PMM2O15305 246 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 RNF40O75150 1001 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 TBX18O95935 607 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 ADH1CP00326 375 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 EGFP01133 1207 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 PAEPP09466 180 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 ZDHHC11BP0C7U3 371 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 RALAP11233 206 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 USP8P40818 1118 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 PGFP49763 221 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 GALK1P51570 392 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 TKTL1P51854 596 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 SATB1Q01826 763 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 PDE4CQ08493 712 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 BST2Q10589 180 aaKnown RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 CCINQ13939 588 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 GAS6Q14393 721 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 ZNF528Q3MIS6 628 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 TMEM196Q5HYL7 178 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 SNX30Q5VWJ9 437 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 BTBD8Q5XKL5 378 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 FSTL4Q6MZW2 842 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 ASCL5Q7RTU5 278 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 CCDC186Q7Z3E2 898 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 TADA2BQ86TJ2 420 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 TTC30AQ86WT1 665 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 MIB1Q86YT6 1006 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 SYNPOQ8N3V7 929 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 UBA3Q8TBC4 463 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 IPO9Q96P70 1041 aaKnown RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 ULBP1Q9BZM6 244 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 NMUR1Q9HB89 426 aa8.62□□□□□ -1.03
SNX1-207ENST00000559401 UBE2TQ9NPD8 197 aaPredicted RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 PRMT8Q9NR22 394 aaPredicted RBP8.62□□□□□ -1.03
SNX1-207ENST00000559401 MYOFQ9NZM1 2061 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 TULP2O00295 520 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 O00370 1275 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 PIK3R2O00459 728 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 XPO1O14980 1071 aaKnown RBP8.61□□□□□ -1.03
SNX1-207ENST00000559401 ATG13O75143 517 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ZBED1O96006 694 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 CALCAP01258 141 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 LMNAP02545 664 aaKnown RBP8.61□□□□□ -1.03
SNX1-207ENST00000559401 HMBSP08397 361 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 SETSIPP0DME0 302 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ADH5P11766 374 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 LCP1P13796 627 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
SNX1-207ENST00000559401 DRD1P21728 446 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 PSEN1P49768 467 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 RGS7P49802 495 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 NRLP54845 237 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 MFAP3P55082 362 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 SEC13P55735 322 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 YWHAGP61981 247 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNX1-207ENST00000559401 GCNT1Q02742 428 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 KDSRQ06136 332 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ADIGQ0VDE8 80 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 EFEMP1Q12805 493 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 DHCR24Q15392 516 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ARHGAP44Q17R89 818 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ANO4Q32M45 955 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 PKN3Q6P5Z2 889 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 GBP6Q6ZN66 633 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 CLEC17AQ6ZS10 378 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 SCD5Q86SK9 330 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 BBS7Q8IWZ6 715 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ARHGAP18Q8N392 663 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 UBR7Q8N806 425 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 LMO3Q8TAP4 145 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 OTUB2Q96DC9 234 aa8.61□□□□□ -1.03
SNX1-207ENST00000559401 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms