RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 SNX25Q9H3E2 840 aa17.8■□□□□ 0.44
PSEN1-224ENST00000559361 SMYD3Q9H7B4 428 aa17.8■□□□□ 0.44
PSEN1-224ENST00000559361 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
PSEN1-224ENST00000559361 UBE2TQ9NPD8 197 aaPredicted RBP17.8■□□□□ 0.44
PSEN1-224ENST00000559361 FAM207AQ9NSI2 230 aaPredicted RBP17.8■□□□□ 0.44
PSEN1-224ENST00000559361 MYO6Q9UM54 1294 aa17.8■□□□□ 0.44
PSEN1-224ENST00000559361 ASB3Q9Y575 518 aa17.8■□□□□ 0.44
PSEN1-224ENST00000559361 NUP205Q92621 2012 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 SMARCB1Q12824 385 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 DPY19L2P1Q6NXN4 242 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 SCARA5Q6ZMJ2 495 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 DNAJB7Q7Z6W7 309 aaPredicted RBP17.79■□□□□ 0.44
PSEN1-224ENST00000559361 VSTM4Q8IW00 320 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 KBTBD7Q8WVZ9 684 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 PGLYRP2Q96PD5 576 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 NAA15Q9BXJ9 866 aaKnown RBP17.79■□□□□ 0.44
PSEN1-224ENST00000559361 STK33Q9BYT3 514 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 GANQ9H2C0 597 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 CISHQ9NSE2 258 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 DDX43Q9NXZ2 648 aaKnown RBP17.79■□□□□ 0.44
PSEN1-224ENST00000559361 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 GON4LQ3T8J9 2241 aa17.79■□□□□ 0.44
PSEN1-224ENST00000559361 ASCC3Q8N3C0 2202 aaKnown RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 A0A1W2PQJ5 194 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 CILPO75339 1184 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 PRAMEF12O95522 483 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 TPM1P09493 284 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 OR4Q2P0C623 313 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 GNL1P36915 607 aaPredicted RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 ALDH1A3P47895 512 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 ZNF75DP51815 510 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 TSPY1Q01534 308 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 TNK2Q07912 1038 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 GSE1Q14687 1217 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 MAPRE1Q15691 268 aaKnown RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 TMEM196Q5HYL7 178 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 RRAGAQ7L523 313 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 ARHGEF19Q8IW93 802 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 OR6B3Q8NGW1 331 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 BPIFB1Q8TDL5 484 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 SHC3Q92529 594 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 TMEM209Q96SK2 561 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 NT5C1AQ9BXI3 368 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 NUCKS1Q9H1E3 243 aaKnown RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 CDH9Q9ULB4 789 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 WASF3Q9UPY6 502 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 CNTN6Q9UQ52 1028 aa17.78■□□□□ 0.44
PSEN1-224ENST00000559361 TIMM13Q9Y5L4 95 aaPredicted RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 ZNF638Q14966 1978 aaKnown RBP17.78■□□□□ 0.44
PSEN1-224ENST00000559361 A8MXQ7 604 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 DPYSL4O14531 572 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 NOL4O94818 638 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 FGF19O95750 216 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 CDC25BP30305 580 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 PXNP49023 591 aaPredicted RBP17.77■□□□□ 0.44
PSEN1-224ENST00000559361 POLR2FP61218 127 aaKnown RBP17.77■□□□□ 0.44
PSEN1-224ENST00000559361 ITPRIPL2Q3MIP1 535 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 GPR158Q5T848 1215 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 DCP1BQ8IZD4 617 aaKnown RBP17.77■□□□□ 0.44
PSEN1-224ENST00000559361 UBR7Q8N806 425 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 ZNF397Q8NF99 534 aaPredicted RBP17.77■□□□□ 0.44
PSEN1-224ENST00000559361 CHFRQ96EP1 664 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 KREMEN1Q96MU8 473 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 SPAG5Q96R06 1193 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 SDCBP2Q9H190 292 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 ATXN3LQ9H3M9 355 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 TASP1Q9H6P5 420 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.44
PSEN1-224ENST00000559361 VPS45Q9NRW7 570 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 HSFX1Q9UBD0 423 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 KIAA1257Q9ULG3 409 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 SLC27A5Q9Y2P5 690 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 FHOD1Q9Y613 1164 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 AKAP13Q12802 2813 aa17.77■□□□□ 0.44
PSEN1-224ENST00000559361 CACNA1EQ15878 2313 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 MTMR11A4FU01 709 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 TRDMT1O14717 391 aaKnown RBP17.76■□□□□ 0.43
PSEN1-224ENST00000559361 PAEPP09466 180 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 CCDC172P0C7W6 258 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 ACO1P21399 889 aaKnown RBP17.76■□□□□ 0.43
PSEN1-224ENST00000559361 GABRR2P28476 465 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 MPLP40238 635 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 CDH8P55286 799 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 BPIFB4P59827 614 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 RAPGEF1Q13905 1077 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 NFE2Q16621 373 aaPredicted RBP17.76■□□□□ 0.43
PSEN1-224ENST00000559361 PLK5Q496M5 336 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 FSTL4Q6MZW2 842 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 CRYBG2Q8N1P7 616 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 CAMKK1Q8N5S9 505 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 TTC9BQ8N6N2 239 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 KDF1Q8NAX2 398 aaPredicted RBP17.76■□□□□ 0.43
PSEN1-224ENST00000559361 ATAD1Q8NBU5 361 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 C2orf15Q8WU43 125 aaKnown RBP17.76■□□□□ 0.43
PSEN1-224ENST00000559361 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
PSEN1-224ENST00000559361 ARID3AQ99856 593 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 FAM83CQ9BQN1 747 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 TTYH3Q9C0H2 523 aa17.76■□□□□ 0.43
PSEN1-224ENST00000559361 SMOC1Q9H4F8 434 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms