RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CYP26A1O43174 497 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 SART1O43290 800 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 LETM1O95202 739 aaPredicted RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 OLFM2O95897 454 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ZBED1O96006 694 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ZDHHC11BP0C7U3 371 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 RARGP13631 454 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PTMSP20962 102 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CDK11BP21127 795 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 DRD1P21728 446 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 TARSP26639 723 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 EEF1GP26641 437 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 CHKAP35790 457 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 USP8P40818 1118 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PLA2G4AP47712 749 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CXCL12P48061 93 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CCR3P51677 355 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 TKTL1P51854 596 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 KIF11P52732 1056 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 COG7P83436 770 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 NHLH1Q02575 133 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PTK2Q05397 1052 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 TCF15Q12870 199 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 USP4Q13107 963 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 KCNJ12Q14500 433 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PON2Q15165 354 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ZNF77Q15935 545 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CNGA2Q16280 664 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 STX1AQ16623 288 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 MAN2A1Q16706 1144 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 GOLGA7BQ2TAP0 167 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ZNF528Q3MIS6 628 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 VWA3BQ502W6 1294 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 C10orf120Q5SQS8 335 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CCDC183Q5T5S1 534 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 BTBD8Q5XKL5 378 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 TRIM68Q6AZZ1 485 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 SMYD5Q6GMV2 418 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 KLHDC10Q6PID8 442 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 LCLAT1Q6UWP7 414 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 MAMSTRQ6ZN01 415 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CCDC186Q7Z3E2 898 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PIGZQ86VD9 579 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ADGRG2Q8IZP9 1017 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 RBBP8NLQ8NC74 664 aaPredicted RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 ZMIZ2Q8NF64 920 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 PRSS33Q8NF86 280 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 LMO3Q8TAP4 145 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ENOX1Q8TC92 643 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 GPT2Q8TD30 523 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 RNF139Q8WU17 664 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 KCTD13Q8WZ19 329 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 SLC39A7Q92504 469 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CLDN23Q96B33 292 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 RSPRY1Q96DX4 576 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 LRRC3BQ96PB8 259 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 SLC22A12Q96S37 553 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 P2RY13Q9BPV8 354 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CRACR2AQ9BSW2 395 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 TRIM62Q9BVG3 475 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 FAM126AQ9BYI3 521 aaPredicted RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 INTS2Q9H0H0 1204 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 NDST4Q9H3R1 872 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 SEMA4AQ9H3S1 761 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CCSER2Q9H7U1 834 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ECT2Q9H8V3 914 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 LMAN1LQ9HAT1 526 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CYLDQ9NQC7 956 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CNGB3Q9NQW8 809 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 OLA1Q9NTK5 396 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 GMIPQ9P107 970 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 DLGAP2Q9P1A6 1054 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CFAP97Q9P2B7 532 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 APEX2Q9UBZ4 518 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 LSM7Q9UK45 103 aaKnown RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 FBXO4Q9UKT5 387 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 ZNF510Q9Y2H8 683 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 MTF2Q9Y483 593 aaPredicted RBP4.6□□□□□ -1.67
SNX1-205ENST00000559339 CEP83Q9Y592 693 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 WNT6Q9Y6F9 365 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 USP3Q9Y6I4 520 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 DOCK8Q8NF50 2099 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 F5P12259 2224 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 CACNA1HO95180 2353 aa4.6□□□□□ -1.67
SNX1-205ENST00000559339 A0A1W2PQH9 124 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 HHLA1C9JL84 531 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 O00370 1275 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 TRDMT1O14717 391 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 THAP12O43422 761 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 FBXO21O94952 628 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 TBX18O95935 607 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 IRF1P10914 325 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 CHRNB1P11230 501 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 LCP1P13796 627 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ARSAP15289 507 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 PON1P27169 355 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 GNA15P30679 374 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 GJA4P35212 333 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 KRT9P35527 623 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 EIF2DP41214 584 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms